RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 GVQW1Q8N7I0 195 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 SUMF2Q8NBJ7 301 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 MAFIPQ8WZ33 124 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 RDH5Q92781 318 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 TMEM186Q96B77 213 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 CMSS1Q9BQ75 279 aaKnown RBP5.29□□□□□ -1.56
HDAC1-205ENST00000472928 FAAP24Q9BTP7 215 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 DPCDQ9BVM2 203 aaPredicted RBP5.29□□□□□ -1.56
HDAC1-205ENST00000472928 EGLN1Q9GZT9 426 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 WDR13Q9H1Z4 485 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 SPACA1Q9HBV2 294 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 CHMP1AQ9HD42 196 aaPredicted RBP5.29□□□□□ -1.56
HDAC1-205ENST00000472928 RANGRFQ9HD47 186 aaPredicted RBP5.29□□□□□ -1.56
HDAC1-205ENST00000472928 HRASLSQ9HDD0 168 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 DECR2Q9NUI1 292 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 MCUBQ9NWR8 336 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 TAS2R8Q9NYW2 309 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 RCC2Q9P258 522 aaKnown RBP5.29□□□□□ -1.56
HDAC1-205ENST00000472928 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 IL19Q9UHD0 177 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 ANAPC10Q9UM13 185 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 NPTNQ9Y639 398 aa5.29□□□□□ -1.56
HDAC1-205ENST00000472928 ARHGAP32A7KAX9 2087 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 LOC105371242A0A075B767 164 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 IGHV3OR15-7A0A075B7D8 119 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 TRAV24A0A0B4J272 114 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 NAP1L6A6NFF2 107 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ZNF736B4DX44 427 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 MCRIP1C9JLW8 97 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 LYNX1G3V0Z9 82 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 H3BUI4 141 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 SLC33A1O00400 549 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 SH2D1BO14796 132 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 DEGS1O15121 323 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 RAB3DO95716 219 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 OR2H2O95918 312 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 CYB5R3P00387 301 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 TFF1P04155 84 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 CSN2P05814 226 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ACAA1P09110 424 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 LYNX1P0DP58 116 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 HKR1P10072 659 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 IRF2P14316 349 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 TNFRSF1AP19438 455 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 DTYMKP23919 212 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 HRH1P35367 487 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 PMELP40967 661 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 CCR6P51684 374 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 UBA52P62987 128 aaKnown RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 IL13RA1P78552 427 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 SRSF3P84103 164 aaKnown RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 FOXL1Q12952 345 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 SCGB2A2Q13296 93 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 MEF2DQ14814 521 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ATXN7L3Q14CW9 347 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ZNF146Q15072 292 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ACTBL2Q562R1 376 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 RNASE10Q5GAN6 216 aaKnown RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 CLLU1Q5K131 121 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 STEAP1BQ6NZ63 245 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 Q6P435 159 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 GCSAMQ8N6F7 178 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 TMEM229BQ8NBD8 167 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 BEST4Q8NFU0 473 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 OR4S1Q8NGB4 309 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 OR4D10Q8NGI6 311 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 OR5AN1Q8NGI8 311 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 OR5H2Q8NGV7 314 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 CLDND2Q8NHS1 167 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 Q8TCH9 128 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ERGIC1Q969X5 290 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 UPRTQ96BW1 309 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 HYLS1Q96M11 299 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 SLC6A7Q99884 636 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 MMP28Q9H239 520 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 DPAGT1Q9H3H5 408 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 LPAR2Q9HBW0 351 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 GCM1Q9NP62 436 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 DCAF16Q9NXF7 216 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ING3Q9NXR8 418 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 TREM2Q9NZC2 230 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 NLKQ9UBE8 527 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 RNF7Q9UBF6 113 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ZNF230Q9UIE0 474 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 ZNF107Q9UII5 783 aaPredicted RBP5.28□□□□□ -1.56
HDAC1-205ENST00000472928 PPP1R3CQ9UQK1 317 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 WIPI2Q9Y4P8 454 aa5.28□□□□□ -1.56
HDAC1-205ENST00000472928 SCO2A0A1W2PP80 73 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 NKX6-3A6NJ46 265 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 RFPL4AA6NLU0 287 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 LRRC30A6NM36 301 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 RFPL4AL1F8VTS6 287 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 I3L521 148 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 CD74P04233 296 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 MSMBP08118 114 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 TBPP20226 339 aa5.27□□□□□ -1.57
HDAC1-205ENST00000472928 ZFP36P26651 326 aaKnown RBP5.27□□□□□ -1.57
HDAC1-205ENST00000472928 SLC6A1P30531 599 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms