RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 RHOFQ9HBH0 211 aa2.23□□□□□ -2.05
SGCE-210ENST00000472326 DDIT4Q9NX09 232 aa2.23□□□□□ -2.05
SGCE-210ENST00000472326 ZNF236Q9UL36 1845 aa2.23□□□□□ -2.05
SGCE-210ENST00000472326 TET1Q8NFU7 2136 aa2.23□□□□□ -2.05
SGCE-210ENST00000472326 ROBO3Q96MS0 1386 aa2.23□□□□□ -2.05
SGCE-210ENST00000472326 TANC1Q9C0D5 1861 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 TTC41PQ6P2S7 1318 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 ATAD5Q96QE3 1844 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 A0A1B0GTQ1 180 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 LOC389332A0A1B0GUA5 103 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 H0YC42 278 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 TRAPPC6AO75865 159 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 STAG3L3P0CL85 134 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 P0DMU3 169 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 FAM231AP0DMU4 169 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 FAM231CP0DMU5 169 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 RALBP11234 206 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 CAVIN4Q5BKX8 364 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 TTMPQ5BVD1 217 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 ZNF567Q8N184 647 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 AGR3Q8TD06 166 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 OR8B2Q96RD0 313 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 TRIM4Q9C037 500 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 POMKQ9H5K3 350 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 LAMA1P25391 3075 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 PTPRQQ9UMZ3 2332 aa2.22□□□□□ -2.05
SGCE-210ENST00000472326 MIA3Q5JRA6 1907 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 IGKV1D-37A0A075B6S9 117 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 A6NED7 52 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 NCF1BA6NI72 391 aaPredicted RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 CENPXA8MT69 81 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 NCF1CA8MVU1 366 aaPredicted RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 FAM25EA8MYX2 175 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 COX7A2P2O60397 106 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 ZNF22P17026 224 aaPredicted RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 MSR1P21757 451 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 CCT6AP40227 531 aaKnown RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 NKAIN1Q4KMZ8 207 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 SETD3Q86TU7 594 aaPredicted RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 OR6K6Q8NGW6 343 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 C22orf15Q8WYQ4 148 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 DOCK6Q96HP0 2047 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 PCNX1Q96RV3 2341 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 TSNAXQ99598 290 aaKnown RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 CHRNA10Q9GZZ6 450 aa2.21□□□□□ -2.06
SGCE-210ENST00000472326 SETD2Q9BYW2 2564 aaPredicted RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 SPENQ96T58 3664 aaKnown RBP2.21□□□□□ -2.06
SGCE-210ENST00000472326 MICAL3Q7RTP6 2002 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 A0A1W2PRF3 423 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 A0A1W2PRM7 423 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 C5orf67F2Z3F1 127 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 SNAI1O95863 264 aaPredicted RBP2.2□□□□□ -2.06
SGCE-210ENST00000472326 OR5AL1P0C617 328 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 HOXB8P17481 243 aaPredicted RBP2.2□□□□□ -2.06
SGCE-210ENST00000472326 PRKACAP17612 351 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 CLDN8P56748 225 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 SLC35B1P78383 322 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 BCL2A1Q16548 175 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 ZNF322Q6U7Q0 402 aaPredicted RBP2.2□□□□□ -2.06
SGCE-210ENST00000472326 HS3ST5Q8IZT8 346 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 ZNF738Q8NE65 137 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 DEFB124Q8NES8 71 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 OR51A7Q8NH64 312 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 LMX1AQ8TE12 382 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.2□□□□□ -2.06
SGCE-210ENST00000472326 CIDECQ96AQ7 238 aaPredicted RBP2.2□□□□□ -2.06
SGCE-210ENST00000472326 NAGKQ9UJ70 344 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 SLC7A11Q9UPY5 501 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 CFL2Q9Y281 166 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 ACACAQ13085 2346 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 GREB1Q4ZG55 1949 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 NAV3Q8IVL0 2385 aa2.2□□□□□ -2.06
SGCE-210ENST00000472326 TSC2P49815 1807 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 PATJQ8NI35 1801 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 ATMQ13315 3056 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 MYH3P11055 1940 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 URB1O60287 2271 aaKnown RBP2.19□□□□□ -2.06
SGCE-210ENST00000472326 TRGV4A0A0C4DH28 118 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 A0A0J9YYE9 177 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 SPAARA0A1B0GVQ0 90 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 SPOPO43791 374 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 OTCP00480 354 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 TRBC1P01850 177 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 CTLA4P16410 223 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 HTR2BP41595 481 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 RPL31P62899 125 aaKnown RBP2.19□□□□□ -2.06
SGCE-210ENST00000472326 TMED1Q13445 227 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 HIKESHIQ53FT3 197 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 PIP5KL1Q5T9C9 394 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 SLC35D2Q76EJ3 337 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 LYZL2Q7Z4W2 148 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 DPPA2Q7Z7J5 298 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 YPEL4Q96NS1 127 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 QKIQ96PU8 341 aaKnown RBP eCLIP2.19□□□□□ -2.06
SGCE-210ENST00000472326 OR5V1Q9UGF6 321 aa2.19□□□□□ -2.06
SGCE-210ENST00000472326 NF1P21359 2839 aa2.18□□□□□ -2.06
SGCE-210ENST00000472326 SPG11Q96JI7 2443 aa2.18□□□□□ -2.06
SGCE-210ENST00000472326 COL6A6A6NMZ7 2263 aa2.18□□□□□ -2.06
SGCE-210ENST00000472326 H7C2Y5 167 aa2.18□□□□□ -2.06
SGCE-210ENST00000472326 SLC37A4O43826 429 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms