RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 CDX1P47902 265 aaPredicted RBP14.74□□□□□ -0.05
RRP1-202ENST00000471909 GNMTQ14749 295 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 IGFL3Q6UXB1 125 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 LINC00596Q86U02 117 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 LGI3Q8N145 548 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 MUC6Q6W4X9 2439 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 GVINP1Q7Z2Y8 2422 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 TRAV24A0A0B4J272 114 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 J3QT63 122 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 HS3ST1O14792 307 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 HERV-K104P61576 105 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 HERPUD1Q15011 391 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 RTL8AQ9BWD3 113 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 PLSCR4Q9NRQ2 329 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 TREM2Q9NZC2 230 aa14.74□□□□□ -0.05
RRP1-202ENST00000471909 IGKV3-15P01624 115 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 RAC2P15153 192 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 ASCL1P50553 236 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 NDUFA6P56556 154 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 EWSR1Q01844 656 aaKnown RBP eCLIP14.73□□□□□ -0.054e-8■■■□□ 17.9
RRP1-202ENST00000471909 PSG7Q13046 419 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 C9orf152Q5JTZ5 239 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 C20orf204Q6ZNR8 217 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 RDH5Q92781 318 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 BOD1Q96IK1 185 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 CACNA1GO43497 2377 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 RBFOX3A6NFN3 312 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 NDUFS6O75380 124 aaKnown RBP14.73□□□□□ -0.05
RRP1-202ENST00000471909 TNFSF13O75888 250 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 SLC34A2O95436 690 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 PYY3Q5JQD4 70 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 OR2G3Q8NGZ4 309 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 MSI2Q96DH6 328 aaKnown RBP14.73□□□□□ -0.05
RRP1-202ENST00000471909 SYT3Q9BQG1 590 aa14.73□□□□□ -0.05
RRP1-202ENST00000471909 GAR1Q9NY12 217 aaKnown RBP14.73□□□□□ -0.05
RRP1-202ENST00000471909 H3BQ15 152 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 ZNF266Q14584 549 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 ZNF674Q2M3X9 581 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 SEM1Q6ZVN7 128 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 ZNF610Q8N9Z0 462 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 SCCPDHQ8NBX0 429 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 C1orf162Q8NEQ5 155 aaPredicted RBP14.72□□□□□ -0.05
RRP1-202ENST00000471909 GTF3AQ92664 365 aaKnown RBP14.72□□□□□ -0.05
RRP1-202ENST00000471909 RAB39BQ96DA2 213 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 ATP23Q9Y6H3 246 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 CEP250Q9BV73 2442 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 LRP5LA4QPB2 252 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 IFITM10A6NMD0 228 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 TRDCB7Z8K6 153 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 PHF1O43189 567 aaPredicted RBP14.72□□□□□ -0.05
RRP1-202ENST00000471909 HOXC12P31275 282 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 TAGLN2P37802 199 aaKnown RBP14.72□□□□□ -0.05
RRP1-202ENST00000471909 MPV17P39210 176 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 CEBPGP53567 150 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 MRPL30Q8TCC3 161 aaKnown RBP14.72□□□□□ -0.05
RRP1-202ENST00000471909 STARD4Q96DR4 205 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 DOK5Q9P104 306 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 TMED3Q9Y3Q3 217 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 MGAQ8IWI9 3026 aa14.72□□□□□ -0.05
RRP1-202ENST00000471909 IGKV1-6A0A0C4DH72 117 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 ZNF727A8MUV8 499 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 IQCF6A8MYZ5 107 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 WDR1O75083 606 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 TK1P04183 234 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 GNRHRP30968 328 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 UBE2KP61086 200 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 CCL20P78556 96 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 CXorf67Q86X51 503 aaPredicted RBP14.71□□□□□ -0.05
RRP1-202ENST00000471909 KLF14Q8TD94 323 aaPredicted RBP14.71□□□□□ -0.05
RRP1-202ENST00000471909 OPN3Q9H1Y3 402 aaPredicted RBP14.71□□□□□ -0.05
RRP1-202ENST00000471909 IGHV3-64DA0A0J9YX35 117 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 KIR2DS1A0A191URI9 304 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 CGAP01215 116 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 ATP6V0CP27449 155 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 KIR2DS4P43632 304 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 ZNF154Q13106 437 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 KIR2DS1Q14954 304 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 Q6P435 159 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 OR2C3Q8N628 320 aa14.71□□□□□ -0.05
RRP1-202ENST00000471909 RIMS4Q9H426 269 aaPredicted RBP14.71□□□□□ -0.05
RRP1-202ENST00000471909 BTBD17A6NE02 478 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 H0YL77 283 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 KLK10O43240 276 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 ERVK11-1P61568 191 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 DEFA6Q01524 100 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 MEX3BQ6ZN04 569 aaKnown RBP14.7□□□□□ -0.06
RRP1-202ENST00000471909 Q6ZS92 163 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 SLC35G3Q8N808 338 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 CCDC71LQ8N9Z2 235 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 OR8G5Q8NG78 346 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 OR4D5Q8NGN0 318 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 ESPL1Q14674 2120 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 A0A087WWC5 75 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 FAM24AA6NFZ4 105 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 K7EM74 188 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 CDIPTO14735 213 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 DEGS1O15121 323 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 RND3P61587 244 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 ZNF383Q8NA42 475 aa14.7□□□□□ -0.06
RRP1-202ENST00000471909 Q8WTZ3 238 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms