RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 SOD3P08294 240 aa21.56■■□□□ 1.04
U2AF1-208ENST00000471250 TBC1D26Q86UD7 250 aa21.56■■□□□ 1.04
U2AF1-208ENST00000471250 BVESQ8NE79 360 aa21.56■■□□□ 1.04
U2AF1-208ENST00000471250 PDCD10Q9BUL8 212 aa21.56■■□□□ 1.04
U2AF1-208ENST00000471250 PARP12Q9H0J9 701 aaKnown RBP21.56■■□□□ 1.04
U2AF1-208ENST00000471250 TMPRSS2O15393 492 aa21.55■■□□□ 1.04
U2AF1-208ENST00000471250 CGB3P0DN86 165 aa21.55■■□□□ 1.04
U2AF1-208ENST00000471250 CGB7P0DN87 165 aa21.55■■□□□ 1.04
U2AF1-208ENST00000471250 SP6Q3SY56 376 aa21.55■■□□□ 1.04
U2AF1-208ENST00000471250 GSG1LQ6UXU4 331 aa21.55■■□□□ 1.04
U2AF1-208ENST00000471250 CMTM1Q8IZ96 169 aa21.55■■□□□ 1.04
U2AF1-208ENST00000471250 C3orf85A0A1B0GTC6 90 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 FAM25EA8MYX2 175 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 ADAP1O75689 374 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 COL8A2P25067 703 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 LAMTOR1Q6IAA8 161 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 LRTM2Q8N967 370 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 RFESDQ8TAC1 157 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 NINJ1Q92982 152 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 SEC22AQ96IW7 307 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 AKR1E2Q96JD6 320 aa21.54■■□□□ 1.04
U2AF1-208ENST00000471250 MEX3AA1L020 520 aaKnown RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 C5orf51A6NDU8 294 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 GNMTQ14749 295 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 LIAT1Q6ZQX7 453 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 C9orf62Q8N4C0 152 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 GLYATL2Q8WU03 294 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 OR2S2Q9NQN1 319 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 BOLA1Q9Y3E2 137 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 RBM7Q9Y580 266 aaKnown RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 A6NNC1 897 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 PHF1O43189 567 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 PGLYRP1O75594 196 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 FSTL3O95633 263 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 OR8U9P0C7N5 309 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 S100GP29377 79 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 OR8U1Q8NH10 309 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 CORO2AQ92828 525 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 MSI2Q96DH6 328 aaKnown RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 TP53RKQ96S44 253 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 METTL8Q9H825 291 aaKnown RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 CALYQ9NYX4 217 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 KAAG1Q9UBP8 84 aa21.53■■□□□ 1.04
U2AF1-208ENST00000471250 SLC25A10Q9UBX3 287 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-208ENST00000471250 C13orf42A0A1B0GVH6 325 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 F2RL2O00254 374 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 NDUFA2O43678 99 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 IGLV2-14P01704 120 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 FAM53AQ6NSI3 398 aaPredicted RBP21.52■■□□□ 1.04
U2AF1-208ENST00000471250 MEX3BQ6ZN04 569 aaKnown RBP21.52■■□□□ 1.04
U2AF1-208ENST00000471250 GRPEL2Q8TAA5 225 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 NEU4Q8WWR8 484 aaPredicted RBP21.52■■□□□ 1.04
U2AF1-208ENST00000471250 TMEM246Q9BRR3 403 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 RAB9BQ9NP90 201 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 PLSCR3Q9NRY6 295 aa21.52■■□□□ 1.04
U2AF1-208ENST00000471250 DSCAML1Q8TD84 2053 aa21.52■■□□□ 1.03
U2AF1-208ENST00000471250 TRGV10A0A0A0MS01 117 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 LYNX1G3V0Z9 82 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 ADAM20O43506 726 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 HOXB5P09067 269 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 LYNX1P0DP58 116 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 PPP1CCP36873 323 aaKnown RBP21.51■■□□□ 1.03
U2AF1-208ENST00000471250 C17orf58Q2M2W7 97 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 LYPD2Q6UXB3 125 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 LGI3Q8N145 548 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 FGFRL1Q8N441 504 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 NMES1Q9C002 83 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 JPT1Q9UK76 154 aa21.51■■□□□ 1.03
U2AF1-208ENST00000471250 SPTBN1Q01082 2364 aaKnown RBP21.51■■□□□ 1.03
U2AF1-208ENST00000471250 IGHV3-43A0A0B4J1X8 118 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 RP2O75695 350 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 WNT2P09544 360 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 IGHV3-43DP0DP04 118 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 NDUFB7P17568 137 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 CYCSP99999 105 aaKnown RBP21.5■■□□□ 1.03
U2AF1-208ENST00000471250 FGL1Q08830 312 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 TCF23Q7RTU1 214 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 C18orf12Q96KH6 178 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 TRAV14DV4A0A0A6YYC5 116 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 GOSR1O95249 250 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 TMEM222Q9H0R3 208 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 KCNS2Q9ULS6 477 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 HSPB11Q9Y547 144 aa21.5■■□□□ 1.03
U2AF1-208ENST00000471250 KBTBD11-OT1A0A1B0GTJ5 212 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 TNFSF12O43508 249 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 NDUFB3O43676 98 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 FCN3O75636 299 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 SRPXP78539 464 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 MRPS11P82912 194 aaKnown RBP21.49■■□□□ 1.03
U2AF1-208ENST00000471250 OR10C1Q96KK4 312 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 C2orf50Q96LR7 162 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 GPHA2Q96T91 129 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 UBTD1Q9HAC8 227 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 COMMD9Q9P000 198 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 CLN8Q9UBY8 286 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 LAMP3Q9UQV4 416 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 UBE2J1Q9Y385 318 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-208ENST00000471250 ABCA4P78363 2273 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 CFAP46Q8IYW2 2715 aa21.49■■□□□ 1.03
U2AF1-208ENST00000471250 hADV38S2A0JD32 116 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms