RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 AUNIPQ9H7T9 357 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 VPS37BQ9H9H4 285 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 NMRK1Q9NWW6 199 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 C14orf166Q9Y224 244 aaKnown RBP0.19□□□□□ -2.38
UBXN4-207ENST00000471246 LINC00588Q9Y4M8 146 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 MINOS1-NBL1R4GNA1 71 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 FAT1Q14517 4588 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 F5P12259 2224 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 SPAG17Q6Q759 2223 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 TRAPPC8Q9Y2L5 1435 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 ADGRB2O60241 1585 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 GLI2P10070 1586 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 ADAMTS12P58397 1594 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 REREQ9P2R6 1566 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 POLR3AO14802 1390 aaPredicted RBP0.19□□□□□ -2.38
UBXN4-207ENST00000471246 DNAH17Q9UFH2 4485 aa0.19□□□□□ -2.38
UBXN4-207ENST00000471246 RGPD1P0DJD0 1748 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 NCOA6Q14686 2063 aaPredicted RBP0.18□□□□□ -2.38
UBXN4-207ENST00000471246 CROCC2H7BZ55 1655 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 SHPRHQ149N8 1683 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 GRIN2AQ12879 1464 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 LRRC37A3O60309 1634 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 KIF21BO75037 1637 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 RNF17Q9BXT8 1623 aaKnown RBP0.18□□□□□ -2.38
UBXN4-207ENST00000471246 IGLV3-9A0A075B6K5 115 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 TRAV25A0A0B4J276 109 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 IGSF23A1L1A6 192 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 OR2AT4A6NND4 320 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 PHGR1C9JFL3 82 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 UPK2O00526 184 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 DNAJB6O75190 326 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 OR8G3PP0DMU2 310 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 TAC1P20366 129 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 PMCHP20382 165 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 PRTN3P24158 256 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 IL12BP29460 328 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 EVI2BP34910 448 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 IDI1Q13907 227 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 DOC2AQ14183 400 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 TPRXLQ17RH7 258 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ZCWPW2Q504Y3 356 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 SYT6Q5T7P8 510 aaPredicted RBP0.18□□□□□ -2.38
UBXN4-207ENST00000471246 LGALS9CQ6DKI2 356 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 C16orf87Q6PH81 154 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ULK3Q6PHR2 472 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 UGT2A3Q6UWM9 527 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 TPGS1Q6ZTW0 290 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 VN1R4Q7Z5H5 301 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 FER1L6-AS1Q8NA97 138 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 OR11G2Q8NGC1 345 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 OR4X1Q8NH49 305 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 NDNFQ8TB73 568 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 NAT6Q93015 286 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 TSNAXQ99598 290 aaKnown RBP0.18□□□□□ -2.38
UBXN4-207ENST00000471246 SPZ1Q9BXG8 430 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ULBP1Q9BZM6 244 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 SLC38A1Q9H2H9 487 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ARMC7Q9H6L4 198 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 KCNIP2Q9NS61 270 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 SLC22A14Q9Y267 594 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 HEY1Q9Y5J3 304 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 PHLDA3Q9Y5J5 127 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 POLEQ07864 2286 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 DNAH3Q8TD57 4116 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 CCDC144AA2RUR9 1427 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ARHGAP31Q2M1Z3 1444 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 RIMS2Q9UQ26 1411 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 VPS13BQ7Z7G8 4022 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 MUC17Q685J3 4493 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ARHGEF10O15013 1369 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 ASXL1Q8IXJ9 1541 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 KDM5DQ9BY66 1539 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 RREB1Q92766 1687 aa0.18□□□□□ -2.38
UBXN4-207ENST00000471246 TNRC6CQ9HCJ0 1690 aaKnown RBP0.18□□□□□ -2.38
UBXN4-207ENST00000471246 A2MP01023 1474 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 GOLGA3Q08378 1498 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PXDNQ92626 1479 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MLH3Q9UHC1 1453 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 RAPGEF2Q9Y4G8 1499 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CAMSAP1Q5T5Y3 1602 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PAPPA2Q9BXP8 1791 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 CTAGE15A4D2H0 777 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF99A8MXY4 864 aaPredicted RBP0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ADGRB1O14514 1584 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 PLCH2O75038 1416 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 TRAPPC6AO75865 159 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 SNX4O95219 450 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 SOX14O95416 240 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 GYPCP04921 128 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 RALBP11234 206 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 M6PRP20645 277 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 NOS1P29475 1434 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 G6PCP35575 357 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 ASIPP42127 132 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MAGEA1P43355 309 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 SMARCA2P51531 1590 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 OR2B6P58173 313 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 BNIP2Q12982 314 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 HTR4Q13639 388 aa0.17□□□□□ -2.38
UBXN4-207ENST00000471246 MMDQ15546 238 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms