RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 OR4F17Q8NGA8 305 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR52R1Q8NGF1 315 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ACER1Q8TDN7 264 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SLC25A43Q8WUT9 341 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ZNRF4Q8WWF5 429 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 MBD3L1Q8WWY6 194 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PPCDCQ96CD2 204 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SDSLQ96GA7 329 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR4C12Q96R67 309 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR4F4Q96R69 305 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 FEVQ99581 238 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SNRNP25Q9BV90 132 aaKnown RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SCRT1Q9BWW7 348 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TM2D2Q9BX73 214 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR2D2Q9H210 308 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SH3BGRL3Q9H299 93 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SH2D2AQ9NP31 389 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 CISHQ9NSE2 258 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 AIG1Q9NVV5 245 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 FAM206AQ9NX38 181 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 CCDC167Q9P0B6 97 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 KIAA1456Q9P272 454 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PEMTQ9UBM1 199 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 CCNL1Q9UK58 526 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PRNDQ9UKY0 176 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 HIGD1AQ9Y241 93 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 BTRCQ9Y297 605 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 LINC00312Q9Y6C7 94 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF780BQ9Y6R6 833 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ATAD5Q96QE3 1844 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 A0A087WWL8 130 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 TRAV14DV4A0A0A6YYC5 116 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 CCDC195A0A1B0GUA6 201 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 LOC285095A0A1B0GVY8 99 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 C7orf71A4D174 169 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR2T8A6NH00 312 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF860A6NHJ4 632 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM212A6NML5 194 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 VWC2LB2RUY7 222 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 UMAD1C9J7I0 102 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 AGFG2O95081 481 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 UBL3O95164 117 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 PTHP01270 115 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 CSN3P07498 182 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 SCTP09683 121 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 SEC11BP0C7V7 166 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 VSIG10L2P0DP72 767 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 PPIFP30405 207 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ARL2P36404 184 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 TNFSF9P41273 254 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 CDKN2AP42771 156 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 MRPS6P82932 125 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 FOXF1Q12946 379 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 KIAA0040Q15053 153 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 C1orf189Q5VU69 101 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 TNFAIP8L2Q6P589 184 aaPredicted RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 C12orf54Q6X4T0 127 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF841Q6ZN19 808 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 COMMD6Q7Z4G1 85 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 TBC1D26Q86UD7 250 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 CMTM4Q8IZR5 234 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ABHD12Q8N2K0 398 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF740Q8NDX6 193 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR8B12Q8NGG6 310 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR51A4Q8NGJ6 313 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR2K2Q8NGT1 345 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR4A5Q8NH83 315 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR1F12Q8NHA8 337 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OLIG1Q8TAK6 271 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 OR51E1Q8TCB6 317 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 SLC38A5Q8WUX1 472 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 LRRC58Q96CX6 371 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 HIST1H2AAQ96QV6 131 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 GGTLC1Q9BX51 225 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 MRPL32Q9BYC8 188 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 SLC35B3Q9H1N7 401 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 PARLQ9H300 379 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 TCEAL2Q9H3H9 227 aaPredicted RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF703Q9H7S9 590 aaPredicted RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 KCNJ16Q9NPI9 418 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 DCAF13Q9NV06 445 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 EHFQ9NZC4 300 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 MDFICQ9P1T7 246 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ASF1AQ9Y294 204 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 PAM16Q9Y3D7 125 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 LSM5Q9Y4Y9 91 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 PXDNLA1KZ92 1463 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 DNMT1P26358 1616 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 ROBO1Q9Y6N7 1651 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 RGPD1P0DJD0 1748 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 DDX60Q8IY21 1712 aaKnown RBP4.34□□□□□ -1.71
COL3A1-205ENST00000470167 LAMB1P07942 1786 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 FRMPD3Q5JV73 1810 aa4.34□□□□□ -1.71
COL3A1-205ENST00000470167 XRN1Q8IZH2 1706 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 PLCH1Q4KWH8 1693 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CICQ96RK0 1608 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 GLI3P10071 1580 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms