RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ACTBP60709 375 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ACTG1P63261 375 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 SMAGPQ0VAQ4 97 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 IHHQ14623 411 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ZCWPW2Q504Y3 356 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 SYPL2Q5VXT5 272 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ZFAND6Q6FIF0 208 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 EBLN2Q6P2I7 272 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 TCF23Q7RTU1 214 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ADM2Q7Z4H4 148 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 DOLPP1Q86YN1 238 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 CPNE9Q8IYJ1 553 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 C10orf67Q8IYJ2 551 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 RPRMLQ8N4K4 120 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 OR4A5Q8NH83 315 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 KCTD4Q8WVF5 259 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 TNFAIP8L1Q8WVP5 186 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 TAMM41Q96BW9 452 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 PACRGQ96M98 296 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-202ENST00000470094 DHRS9Q9BPW9 319 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ARL6Q9H0F7 186 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ALX4Q9H161 411 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-202ENST00000470094 OR2D2Q9H210 308 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 MS4A6AQ9H2W1 248 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 UBQLN4Q9NRR5 601 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 FAM206AQ9NX38 181 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ZNF230Q9UIE0 474 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-202ENST00000470094 POLR3HQ9Y535 204 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-202ENST00000470094 SHANK1Q9Y566 2161 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 TRAPPC1Q9Y5R8 145 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 ICOSQ9Y6W8 199 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 SVILO95425 2214 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 MIA3Q5JRA6 1907 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 DNMT1P26358 1616 aaKnown RBP1.87□□□□□ -2.11
BRCA2-202ENST00000470094 SHROOM3Q8TF72 1996 aa1.87□□□□□ -2.11
BRCA2-202ENST00000470094 COL5A1P20908 1838 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-202ENST00000470094 LOXHD1Q8IVV2 1947 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 IGHV3OR15-7A0A075B7D8 119 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ARGFXA6NJG6 315 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 H3BQ85 93 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 H3BSA7 217 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 M0R036 132 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 CXCR6O00574 342 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 SSNA1O43805 119 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 CTXN2P0C2S0 81 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ZNF7P17097 686 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-202ENST00000470094 GADD45AP24522 165 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 CD34P28906 385 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 IFNGR2P38484 337 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 SULT1A2P50226 295 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 CEBPGP53567 150 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 DAD1P61803 113 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 MEF2BQ02080 365 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-202ENST00000470094 CASP8Q14790 479 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 UAP1Q16222 522 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-202ENST00000470094 CD200R1LQ6Q8B3 271 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 Q6ZRU5 148 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ZBTB8OSQ8IWT0 167 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 YIPF7Q8N8F6 280 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 FER1L6-AS1Q8NA97 138 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ZNF680Q8NEM1 530 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 C1orf64Q8NEQ6 169 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ZNRF2Q8NHG8 242 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 PIGXQ8TBF5 258 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ASB13Q8WXK3 278 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 APOBEC3DQ96AK3 386 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-202ENST00000470094 GALMQ96C23 342 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 OR2V2Q96R30 315 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 TRIB3Q96RU7 358 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 ZNF286AQ9HBT8 521 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 FGFR1OP2Q9NVK5 253 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 GLS2Q9UI32 602 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 SNAPC4Q5SXM2 1469 aa1.86□□□□□ -2.11
BRCA2-202ENST00000470094 KIAA1671Q9BY89 1806 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 B4DEV8 164 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 F5H5T6 163 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 GOLGA6L19H0YKK7 550 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 H3BMM0 161 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 TRAPPC3O43617 180 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 RPP14O95059 124 aaKnown RBP1.85□□□□□ -2.11
BRCA2-202ENST00000470094 IGHV3-53P01767 116 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 ISG15P05161 165 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 GUSBP08236 651 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 FBP1P09467 338 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 CFL1P23528 166 aaKnown RBP1.85□□□□□ -2.11
BRCA2-202ENST00000470094 PSMA1P25786 263 aaKnown RBP1.85□□□□□ -2.11
BRCA2-202ENST00000470094 PSMB3P49720 205 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 AP2S1P53680 142 aaPredicted RBP1.85□□□□□ -2.11
BRCA2-202ENST00000470094 KLF3P57682 345 aaPredicted RBP1.85□□□□□ -2.11
BRCA2-202ENST00000470094 GABARAPL2P60520 117 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 TRMT12Q53H54 448 aaKnown RBP1.85□□□□□ -2.11
BRCA2-202ENST00000470094 SPIN4Q56A73 249 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 MESTQ5EB52 335 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 SPATA31B1PQ5VZV4 182 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 LRRN1Q6UXK5 716 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 Q6ZQT7 251 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 NIT1Q86X76 327 aa1.85□□□□□ -2.11
BRCA2-202ENST00000470094 C3orf22Q8N5N4 141 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms