RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 OCSTAMPQ9BR26 566 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 BEX2Q9BXY8 128 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
COL9A3-209ENST00000469852 HEXA-AS1Q9H8Q6 139 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 GFOD1Q9NXC2 390 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 OR1A1Q9P1Q5 309 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 CDC42EP3Q9UKI2 254 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 NUP50Q9UKX7 468 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 PSG11Q9UQ72 335 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 V9GYH0 126 aa12.03□□□□□ -0.48
COL9A3-209ENST00000469852 POM121CA8CG34 1229 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 NPFFO15130 113 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 SLC31A2O15432 143 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 FABP7O15540 132 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 CRLF1O75462 422 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 PAX6P26367 422 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 CD34P28906 385 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 DGCR2P98153 550 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 IL18Q14116 193 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 ZNF626Q68DY1 528 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 OR52W1Q6IF63 320 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 Q6ZS49 121 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 LHFPL4Q7Z7J7 247 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 HOGA1Q86XE5 327 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 GALMQ96C23 342 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 OR2S2Q9NQN1 319 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 ANAPC10Q9UM13 185 aa12.02□□□□□ -0.49
COL9A3-209ENST00000469852 FBN3Q75N90 2809 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 A0A0U1RQK1 487 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 MDFIC2A0A1B0GVS7 189 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 IGLV1-47P01700 117 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 ARG1P05089 322 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 LPLP06858 475 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 EPHA1P21709 976 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 S100A5P33763 92 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 SAA4P35542 130 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 ZNF134P52741 427 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 HTD2P86397 168 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 SRSF7Q16629 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
COL9A3-209ENST00000469852 CHRFAM7AQ494W8 412 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 FAM131AQ6UXB0 335 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 BEST4Q8NFU0 473 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 OR4P4Q8NGL7 312 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 OR4A4PQ8NGN8 299 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 OR52I2Q8NH67 350 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 MDFIQ99750 246 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 CABLES2Q9BTV7 478 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 GNG12Q9UBI6 72 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 SLC23A1Q9UHI7 598 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
COL9A3-209ENST00000469852 FABP12A6NFH5 140 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 J3QR06 171 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 BET1O15155 118 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 SRD5A1P18405 259 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 KIR2DS4P43632 304 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 KIR2DS1Q14954 304 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 ZNF79Q15937 498 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 MORN2Q502X0 79 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 DYNAPQ8N1N2 210 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
COL9A3-209ENST00000469852 SCPEP1Q9HB40 452 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 PTTG2Q9NZH5 202 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 KLK11Q9UBX7 282 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 ANXA10Q9UJ72 324 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 JPT1Q9UK76 154 aa12□□□□□ -0.49
COL9A3-209ENST00000469852 TRBV6-7A0A0A0MS04 114 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 TPPPO94811 219 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 NAT1P18440 290 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 CBX5P45973 191 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 TUSC1Q2TAM9 212 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 HLA-DRB5Q30154 266 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 PYHIN1Q6K0P9 492 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 LYSMD2Q8IV50 215 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 OR9G1Q8NH87 305 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 SLC6A7Q99884 636 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 MS4A7Q9GZW8 240 aaPredicted RBP11.99□□□□□ -0.49
COL9A3-209ENST00000469852 RAB9BQ9NP90 201 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 IFT46Q9NQC8 304 aa11.99□□□□□ -0.49
COL9A3-209ENST00000469852 SULT1C2O00338 296 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 CTDSPLO15194 276 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 LANCL1O43813 399 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 YPEL1O60688 119 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 CEACAM6P40199 344 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 DIAPH2-AS1Q14236 149 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 TMEM30BQ3MIR4 351 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 MIDNQ504T8 468 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 STEAP3Q658P3 488 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 LDLRAD3Q86YD5 345 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 TEX29Q8N6K0 151 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms