RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 RHBDD3Q9Y3P4 386 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 TRBV24-1A0A075B6N3 115 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 G3V4G9 280 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 TRAPPC2LH3BP13 241 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 SLC16A7O60669 478 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 BRI3O95415 125 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 DUSP1P28562 367 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 MGAT2Q10469 447 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 MEPCEQ7L2J0 689 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 ZNF627Q7L945 461 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 DERL1Q9BUN8 251 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 SAMD10Q9BYL1 202 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 ZMAT3Q9HA38 289 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 ELL3Q9HB65 397 aaPredicted RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 TMED7-TICAM2A0A0A6YYA0 188 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 ZNF736B4DX44 427 aaPredicted RBP8.61□□□□□ -1.03
NUP50-214ENST00000469163 TRAF3IP2O43734 574 aaPredicted RBP8.61□□□□□ -1.03
NUP50-214ENST00000469163 PET100P0DJ07 73 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 GSTM3P21266 225 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 CYB561P49447 251 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 RND3P61587 244 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 SIRPAP78324 504 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 TMEM267Q0VDI3 215 aaPredicted RBP8.61□□□□□ -1.03
NUP50-214ENST00000469163 CDCP2Q5VXM1 449 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 OR2AJ1Q8NGZ0 328 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 OR2AE1Q8NHA4 323 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 ZNF417Q8TAU3 575 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 CMTM2Q8TAZ6 248 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 AQP10Q96PS8 301 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 OR5B12Q96R08 314 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 ZNF581Q9P0T4 197 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 VSIG4Q9Y279 399 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 TMED7Q9Y3B3 224 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 TMEM131Q92545 1883 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 CCDC168Q8NDH2 2452 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 A0A1W2PR80 420 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 HYPMO75409 117 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 CD55P08174 381 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 TMEM225BP0DP42 221 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 RPL12P30050 165 aaKnown RBP8.61□□□□□ -1.03
NUP50-214ENST00000469163 ATP5J2P56134 94 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 IL11RAQ14626 422 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 TMEM249Q2WGJ8 235 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 PRSS33Q8NF86 280 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 HCAR1Q9BXC0 346 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 ELOVL5Q9NYP7 299 aa8.61□□□□□ -1.03
NUP50-214ENST00000469163 A0A0G2JMM0 328 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 A0A1W2PPB8 328 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 ZNF716A6NP11 495 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 KIR3DP1A8MWS1 328 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 DANCRP0C864 163 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 ZNF735P0CB33 412 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 HLA-DOBP13765 273 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 RHOGP84095 191 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 FMODQ06828 376 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 TCF15Q12870 199 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 ACOT6Q3I5F7 207 aaPredicted RBP8.6□□□□□ -1.03
NUP50-214ENST00000469163 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 C5orf17Q8NAS9 161 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 OR51A2Q8NGJ7 313 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 OR1B1Q8NGR6 318 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 NKD1Q969G9 470 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 FAM103A1Q9BTL3 118 aaKnown RBP8.6□□□□□ -1.03
NUP50-214ENST00000469163 LPAR5Q9H1C0 372 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 WDR76Q9H967 626 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 GPR27Q9NS67 375 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 DNAJB12Q9NXW2 375 aaKnown RBP8.6□□□□□ -1.03
NUP50-214ENST00000469163 MTCH1Q9NZJ7 389 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 ICAM5Q9UMF0 924 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 DOCK10Q96BY6 2186 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 CDIPTO14735 213 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 NKX2-2O95096 273 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 SYNGR4O95473 234 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 MAS1P04201 325 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 HIST1H1CP16403 213 aaKnown RBP8.6□□□□□ -1.03
NUP50-214ENST00000469163 CX3CR1P49238 355 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 CCL20P78556 96 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 MBOAT2Q6ZWT7 520 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 CNEP1R1Q8N9A8 125 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 SPXQ9BT56 116 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 PLEKHJ1Q9NW61 149 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 TRBV6-7A0A0A0MS04 114 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 NGFRP08138 427 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 PATE4P0C8F1 98 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
NUP50-214ENST00000469163 PLPPR5Q32ZL2 321 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 BSXQ3C1V8 233 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 KIAA1644Q3SXP7 199 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 ZNF788Q6ZQV5 615 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 NMES1Q9C002 83 aa8.6□□□□□ -1.03
NUP50-214ENST00000469163 PCNX3Q9H6A9 2034 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 BORCS7-ASMTA0A0B4J1R7 106 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 TNFSF11O14788 317 aa8.59□□□□□ -1.03
NUP50-214ENST00000469163 SRP19P09132 144 aaKnown RBP8.59□□□□□ -1.03
NUP50-214ENST00000469163 SCGB1A1P11684 91 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms