RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CALHM1Q8IU99 346 aa11.89□□□□□ -0.51
COL27A1-203ENST00000468565 H1FXQ92522 213 aaKnown RBP11.89□□□□□ -0.51
COL27A1-203ENST00000468565 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
COL27A1-203ENST00000468565 C12orf4Q9NQ89 552 aa11.89□□□□□ -0.51
COL27A1-203ENST00000468565 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
COL27A1-203ENST00000468565 IGHV1-69DA0A0B4J2H0 117 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 IGHV1-69P01742 117 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 TBPP20226 339 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 CNN3Q15417 329 aaKnown RBP11.88□□□□□ -0.51
COL27A1-203ENST00000468565 DEFB112Q30KQ8 113 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 RUSC1-AS1Q66K80 236 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 LHX4Q969G2 390 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 ZNF488Q96MN9 340 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 SLC2A8Q9NY64 477 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 MDFIC2A0A1B0GVS7 189 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 FAM230AA0A1W2PPH8 454 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 GOSR2O14653 212 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 RGS11O94810 467 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 NXPH2O95156 264 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 MPIG6BO95866 241 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 IFNA7P01567 189 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 GSTP1P09211 210 aaKnown RBP11.88□□□□□ -0.51
COL27A1-203ENST00000468565 HKR1P10072 659 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 NDUFB7P17568 137 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 OR3A4PP47883 348 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 SCGB2B2Q4G0G5 96 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 CD177Q8N6Q3 437 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 UXS1Q8NBZ7 420 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 ZNRF1Q8ND25 227 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 ZNF680Q8NEM1 530 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 DUX5Q96PT3 197 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 SPACA5Q96QH8 159 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 URM1Q9BTM9 101 aaKnown RBP11.88□□□□□ -0.51
COL27A1-203ENST00000468565 TMEM59Q9BXS4 323 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 LPAR5Q9H1C0 372 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 HEXA-AS1Q9H8Q6 139 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 GHRLQ9UBU3 117 aa11.88□□□□□ -0.51
COL27A1-203ENST00000468565 RFPL4AA6NLU0 287 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 RFPL4AL1F8VTS6 287 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 H3BUI4 141 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 M0R1W7 72 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 OR4E1P0C645 316 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 GNB3P16520 340 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 OR3A3P47888 321 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 C11orf88Q6PI97 169 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 TMED4Q7Z7H5 227 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 OR56B1Q8NGI3 324 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 BORCS8Q96FH0 119 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 DPCDQ9BVM2 203 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-203ENST00000468565 CHST6Q9GZX3 395 aa11.87□□□□□ -0.51
COL27A1-203ENST00000468565 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 L7N2F9 121 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 SLC22A5O76082 557 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 KNG1P01042 644 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 PRDX2P32119 198 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 Q6YL49 198 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-203ENST00000468565 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 Q8N7P7 452 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 OR4S1Q8NGB4 309 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 NUDCD2Q8WVJ2 157 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 RAB3CQ96E17 227 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 CST11Q9H112 138 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 IGKV1-9A0A0C4DH69 117 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-203ENST00000468565 CRTAPO75718 401 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-203ENST00000468565 IFNA6P05013 189 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 CSN2P05814 226 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 NFYAP23511 347 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-203ENST00000468565 FOXL1Q12952 345 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 UNKLQ9H9P5 680 aaKnown RBP11.86□□□□□ -0.51
COL27A1-203ENST00000468565 ELL3Q9HB65 397 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-203ENST00000468565 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
COL27A1-203ENST00000468565 TENM1Q9UKZ4 2725 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 FBN3Q75N90 2809 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 HIST1H1DP16402 221 aaKnown RBP11.85□□□□□ -0.51
COL27A1-203ENST00000468565 RBP2P50120 134 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 ATP1B3P54709 279 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 OPCMLQ14982 345 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 KISS1Q15726 138 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 GRK1Q15835 563 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 ACTBL2Q562R1 376 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 AWAT1Q58HT5 328 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 RNF144BQ7Z419 303 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 TMEM104Q8NE00 496 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 SPSB1Q96BD6 273 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 NICN1Q9BSH3 213 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 FAM234AQ9H0X4 552 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 BANF2Q9H503 90 aa11.85□□□□□ -0.51
COL27A1-203ENST00000468565 METTL8Q9H825 291 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms