RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 C10orf25Q5T742 122 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 HACD4Q5VWC8 232 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 TEX36Q5VZQ5 186 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 STUMQ69YW2 141 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 OR52W1Q6IF63 320 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 C17orf107Q6ZR85 190 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 LINC00299Q6ZSB3 139 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 GDPD3Q7L5L3 318 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SLC36A1Q7Z2H8 476 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 LINC00596Q86U02 117 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM185AQ8N0U4 392 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 TOMM5Q8N4H5 51 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 GDPD1Q8N9F7 314 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 POC5Q8NA72 575 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ANGPTL6Q8NI99 470 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 RFESDQ8TAC1 157 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 GPX8Q8TED1 209 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 WIPF2Q8TF74 440 aaPredicted RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 C15orf40Q8WUR7 153 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 BORCS5Q969J3 196 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MED30Q96HR3 178 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 GAFA1Q96PS6 74 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SDHCQ99643 169 aaPredicted RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 DCTN5Q9BTE1 182 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SHARPINQ9H0F6 387 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 RHOFQ9HBH0 211 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SPACA1Q9HBV2 294 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MCUBQ9NWR8 336 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 RABL2AQ9UBK7 228 aaPredicted RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SLC25A10Q9UBX3 287 aaPredicted RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 KIF25Q9UIL4 384 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF222Q9UK12 451 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 HSF4Q9ULV5 492 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 RABL2BQ9UNT1 228 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 KCNK7Q9Y2U2 307 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MAB21L2Q9Y586 359 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 CHD3Q12873 2000 aaKnown RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 CACNA1DQ01668 2161 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ABCA4P78363 2273 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 DSCAMO60469 2012 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IGKV1D-8A0A087WSZ0 117 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV3-43A0A0B4J1X8 118 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A1W2PQ09 198 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM30CPA0ZSE6 113 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CENPXA8MT69 81 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CEACAM18A8MTB9 384 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SERPINE3A8MV23 424 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 GABARAPH6UMI1 98 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 K7N7A8 449 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SULT1C2O00338 296 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SDCBPO00560 298 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 DVL1O14640 695 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 BET1O15155 118 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CTDSPLO15194 276 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SIGLEC5O15389 551 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 PHF1O43189 567 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 NDUFA2O43678 99 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 GSTZ1O43708 216 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF737O75373 536 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 UPK1BO75841 260 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 RAB3DO95716 219 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ECDO95905 644 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV2-70P01814 119 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MT-ND4P03905 459 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CD3DP04234 171 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IFNA6P05013 189 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MELTFP08582 738 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SCTP09683 121 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 GSTT2P0CG29 244 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV3-43DP0DP04 118 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 LYL1P12980 280 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 RCC1P18754 421 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 LMO1P25800 156 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 GLP1RP43220 463 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CBX5P45973 191 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 OR3A1P47881 315 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 OR3A3P47888 321 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 RFX2P48378 723 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ARPC4P59998 168 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 TSPAN5P62079 268 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MRPS10P82664 201 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MRPS11P82912 194 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 IFITM3Q01628 133 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 DCTN2Q13561 401 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CLEC12BQ2HXU8 276 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 DEFB113Q30KQ7 82 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CHRFAM7AQ494W8 412 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SCGB2B2Q4G0G5 96 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 FAAP20Q6NZ36 180 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 CLEC2AQ6UVW9 174 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 BTN2A1Q7KYR7 527 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 HOGA1Q86XE5 327 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 MUC20Q8N307 709 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF561Q8N587 486 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 SPICQ8N5J4 248 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 BEST4Q8NFU0 473 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 OR8B3Q8NGG8 313 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 OR5D13Q8NGL4 314 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 OR5H2Q8NGV7 314 aa3.36□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM110DQ8TAY7 271 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms