RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 IGKV1D-8A0A087WSZ0 117 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 HSPA12AO43301 675 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 GSTZ1O43708 216 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-202ENST00000468040 FSHBP01225 129 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 NAT1P18440 290 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
SNIP1-202ENST00000468040 TAS2R46P59540 309 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 DGCR2P98153 550 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 PRB3Q04118 309 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-202ENST00000468040 KLRD1Q13241 179 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF79Q15937 498 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 CHRFAM7AQ494W8 412 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 RNASE12Q5GAN4 147 aaKnown RBP12.41□□□□□ -0.42
SNIP1-202ENST00000468040 KLF17Q5JT82 389 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-202ENST00000468040 LY6G6FQ5SQ64 297 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 HCP5Q6MZN7 132 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 C8orf31Q8N9H6 132 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 OR9G1Q8NH87 305 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 OR10J5Q8NHC4 309 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF596Q8TC21 504 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 SNAPC3Q92966 411 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 SLC23A1Q9UHI7 598 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 NUP50Q9UKX7 468 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 F8P00451 2351 aa12.41□□□□□ -0.42
SNIP1-202ENST00000468040 TRBV6-7A0A0A0MS04 114 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 IGHV3-43A0A0B4J1X8 118 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 IGKV1-6A0A0C4DH72 117 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 FAM172BPA6NC97 362 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 TOR1AO14656 332 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 YPEL1O60688 119 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 FCER2P06734 321 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 IGHV3-43DP0DP04 118 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 IGHV4-38-2P0DP08 117 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 PRRX1P54821 245 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 HERPUD1Q15011 391 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 MORN2Q502X0 79 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 MIDNQ504T8 468 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 IGSF11Q5DX21 431 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF626Q68DY1 528 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 Q71RC1 249 aaPredicted RBP12.4□□□□□ -0.42
SNIP1-202ENST00000468040 C5orf24Q7Z6I8 188 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 Q8N402 240 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 BEND2Q8NDZ0 799 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 OR5AP2Q8NGF4 316 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 OR52L2PQ8NGH6 319 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 YPEL2Q96QA6 119 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 GINS4Q9BRT9 223 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 BEX2Q9BXY8 128 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 NECAP2Q9NVZ3 263 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 TAS2R8Q9NYW2 309 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 KLK11Q9UBX7 282 aa12.4□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
SNIP1-202ENST00000468040 RBMX2Q9Y388 322 aaKnown RBP12.4□□□□□ -0.42
SNIP1-202ENST00000468040 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 NPFFO15130 113 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 BET1O15155 118 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 ARG1P05089 322 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 TBPP20226 339 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 PPP1CCP36873 323 aaKnown RBP12.39□□□□□ -0.43
SNIP1-202ENST00000468040 CEACAM6P40199 344 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 OR3A3P47888 321 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 GNG10P50151 68 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 LGALS4P56470 323 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 GNMTQ14749 295 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 OR5H2Q8NGV7 314 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 EDARADDQ8WWZ3 215 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 LEAP2Q969E1 77 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 CREB3L1Q96BA8 519 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 SRRQ9GZT4 340 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 AKIP1Q9NQ31 210 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 OR1A1Q9P1Q5 309 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
SNIP1-202ENST00000468040 AMMECR1Q9Y4X0 333 aaPredicted RBP12.39□□□□□ -0.43
SNIP1-202ENST00000468040 IGHV3OR16-10A0A075B7F0 116 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
SNIP1-202ENST00000468040 INAFM1C9JVW0 142 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 J3QR06 171 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 ITGB1BP1O14713 200 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 CSF1P09603 554 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 HLA-DMAP28067 261 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 TAS2R19P59542 299 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 CDK10Q15131 360 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 IL17RELQ6ZVW7 336 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 MFSD4AQ8N468 514 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 LINC00311Q8N616 119 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 OR2AK2Q8NG84 335 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 FAM216AQ8WUB2 273 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 THAP7Q9BT49 309 aaPredicted RBP12.38□□□□□ -0.43
SNIP1-202ENST00000468040 MS4A7Q9GZW8 240 aaPredicted RBP12.38□□□□□ -0.43
SNIP1-202ENST00000468040 TOLLIPQ9H0E2 274 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms