RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SLC35B3Q9H1N7 401 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 SEBOXQ9HB31 216 aaPredicted RBP11.86□□□□□ -0.51
BRAT1-203ENST00000467558 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 SLC25A10Q9UBX3 287 aaPredicted RBP11.86□□□□□ -0.51
BRAT1-203ENST00000467558 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 CLDN14O95500 239 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 NPBWR2P48146 333 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 LHX2P50458 406 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 SNX22Q96L94 193 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 PATZ1Q9HBE1 687 aaKnown RBP11.86□□□□□ -0.51
BRAT1-203ENST00000467558 DEPPQ9NTK1 212 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 RNF24Q9Y225 148 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 FRMPD3Q5JV73 1810 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 TGOLN2O43493 480 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 UNC119Q13432 240 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 CLEC9AQ6UXN8 241 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 BPIFCQ8NFQ6 507 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 OR51I2Q9H344 312 aa11.86□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF331Q9NQX6 463 aaPredicted RBP11.86□□□□□ -0.51
BRAT1-203ENST00000467558 FREM3P0C091 2139 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 NEURL1O76050 574 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OPN1MWP04001 364 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OPN1MW2P0DN77 364 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OPN1MW3P0DN78 364 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 CLDN18P56856 261 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 HEXA-AS1Q9H8Q6 139 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 PRNDQ9UKY0 176 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 CLPSP04118 112 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 NDUFA6P56556 154 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 TIMM23BQ5SRD1 257 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 TCTEX1D1Q8N7M0 179 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 VOPP1Q96AW1 172 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 TMEM222Q9H0R3 208 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 H0Y980 276 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 NR2C2APQ86WQ0 139 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 C1orf162Q8NEQ5 155 aaPredicted RBP11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OR10G4Q8NGN3 311 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OR10G9Q8NGN4 311 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OR10G7Q8NGN6 311 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 NPAS1Q99742 590 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 RAB29O14966 203 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 MELTFP08582 738 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 G6PCP35575 357 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
BRAT1-203ENST00000467558 RHOBP62745 196 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF90Q03938 601 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF154Q13106 437 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF429Q86V71 674 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 OR5P3Q8WZ94 311 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 CCL13Q99616 98 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF552Q9H707 407 aaPredicted RBP11.85□□□□□ -0.51
BRAT1-203ENST00000467558 THYN1Q9P016 225 aa11.85□□□□□ -0.51
BRAT1-203ENST00000467558 ZNF705GA8MUZ8 300 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-203ENST00000467558 SOX15O60248 233 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 IGFBP3P17936 291 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-203ENST00000467558 RCC1P18754 421 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-203ENST00000467558 AKR1C3P42330 323 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 P2RY4P51582 365 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 BAGE3Q86Y29 109 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 BAGE2Q86Y30 109 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
BRAT1-203ENST00000467558 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 SLC45A2Q9UMX9 530 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 ROS1P08922 2347 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 EFNA2O43921 213 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-203ENST00000467558 NAAAQ02083 359 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 BTNL8Q6UX41 500 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 C1QL2Q7Z5L3 287 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 WDYHV1Q96HA8 205 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 INSIG2Q9Y5U4 225 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 HSBP1L1C9JCN9 74 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 OR4A8P0C604 315 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
BRAT1-203ENST00000467558 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
BRAT1-203ENST00000467558 CRYM-AS1A6NIL9 109 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 PRR32B1ATL7 298 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 HLA-GP17693 338 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 PHYHD1Q5SRE7 291 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 VWA1Q6PCB0 445 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 GCSAMQ8N6F7 178 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 BMPERQ8N8U9 685 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 BCL2L2Q92843 193 aaPredicted RBP11.83□□□□□ -0.52
BRAT1-203ENST00000467558 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 C5orf66Q9H5L9 145 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 ODAMA1E959 279 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF716A6NP11 495 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 CLEC3BP05452 202 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 KLK2P20151 261 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 GLRXP35754 106 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 PTGDSP41222 190 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF66Q6ZN08 573 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 DBX2Q6ZNG2 339 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 OR52L2PQ8NGH6 319 aa11.83□□□□□ -0.52
BRAT1-203ENST00000467558 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms