RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ZFP2Q6ZN57 461 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 TMEM86BQ8N661 226 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 SLC30A7Q8NEW0 376 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 OR5AK3PQ8NH89 298 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 CLHC1Q8NHS4 586 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 GEMIN6Q8WXD5 167 aaKnown RBP1.93□□□□□ -2.1
XRN1-206ENST00000467077 ACOT11Q8WXI4 607 aaPredicted RBP1.93□□□□□ -2.1
XRN1-206ENST00000467077 PLEKHA8Q96JA3 519 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 TSSK3Q96PN8 268 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 ZNF382Q96SR6 550 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 CNN2Q99439 309 aaKnown RBP1.93□□□□□ -2.1
XRN1-206ENST00000467077 B9D2Q9BPU9 175 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 MRPL57Q9BQC6 102 aaKnown RBP1.93□□□□□ -2.1
XRN1-206ENST00000467077 ROPN1BQ9BZX4 212 aaPredicted RBP1.93□□□□□ -2.1
XRN1-206ENST00000467077 ANKRD19PQ9H560 264 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 C16orf95Q9H693 158 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 TMEM165Q9HC07 324 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 RRAGDQ9NQL2 400 aaPredicted RBP1.93□□□□□ -2.1
XRN1-206ENST00000467077 CCL28Q9NRJ3 127 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 TMEM106BQ9NUM4 274 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 EXD2Q9NVH0 621 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 DCAF16Q9NXF7 216 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 FBXL3Q9UKT7 428 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 POFUT2Q9Y2G5 429 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 STK38LQ9Y2H1 464 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 SNX24Q9Y343 169 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 U3KQK5 164 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 HYDINQ4G0P3 5121 aa1.93□□□□□ -2.1
XRN1-206ENST00000467077 TENM3Q9P273 2699 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 IGLV3-9A0A075B6K5 115 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CENPVL3A0A0U1RRI6 287 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 LCE6AA0A183 80 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 KIR2DS1A0A191URI9 304 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CCDC182A6NF36 153 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ZNF726A6NNF4 738 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CEACAM18A8MTB9 384 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 EIF3HO15372 352 aaKnown RBP eCLIP1.92□□□□□ -2.1
XRN1-206ENST00000467077 MGRN1O60291 552 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 OR7A10O76100 309 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 AHSA1O95433 338 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 C6orf47O95873 294 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 PTHP01270 115 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 GAPDHP04406 335 aaKnown RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 TFPTP0C1Z6 253 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ETS2P15036 469 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 NQO1P15559 274 aaKnown RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 TAC1P20366 129 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 TGFBR2P37173 567 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 PMELP40967 661 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CRATP43155 626 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 RPS5P46782 204 aaKnown RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 FOXA1P55317 472 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 COPZ1P61923 177 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 RPL38P63173 70 aaKnown RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 MRPS25P82663 173 aaKnown RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 HPCAP84074 193 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 NAB1Q13506 487 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 GK3PQ14409 553 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 KIAA0087Q14695 138 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 GNMTQ14749 295 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 DGUOKQ16854 277 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SLC36A2Q495M3 483 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 LRRC10Q5BKY1 277 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 PHYHD1Q5SRE7 291 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ZNF678Q5SXM1 525 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 THEM4Q5T1C6 240 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 C1orf140Q5VVS0 124 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CLEC6AQ6EIG7 209 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 TMEM53Q6P2H8 277 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 H2BFWTQ7Z2G1 175 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 C6orf120Q7Z4R8 191 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 LINC01551Q86U37 167 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 LRRC28Q86X40 367 aaPredicted RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 LRRC8AQ8IWT6 810 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 PDZD9Q8IXQ8 264 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SLC22A24Q8N4F4 322 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ZNF283Q8N7M2 679 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CCNYL1Q8N7R7 359 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SDR9C7Q8NEX9 313 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 NPBQ8NG41 125 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 OR2Z1Q8NG97 314 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 OR8B3Q8NGG8 313 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 OR6N1Q8NGY5 312 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 MUC7Q8TAX7 377 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 OR5P2Q8WZ92 322 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ROPN1LQ96C74 230 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 RBMXL1Q96E39 390 aaKnown RBP1.92□□□□□ -2.1
XRN1-206ENST00000467077 CCDC126Q96EE4 140 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 RNF185Q96GF1 192 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SLC35G5Q96KT7 338 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ZNF75AQ96N20 296 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 OR8B2Q96RD0 313 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SH3GL3Q99963 347 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 RHOXF2Q9BQY4 288 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 EMC6Q9BV81 110 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 ULBP2Q9BZM5 246 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 BCL2L14Q9BZR8 327 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SLC19A3Q9BZV2 496 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 DPY30Q9C005 99 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms