RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 GSTT2BP0CG30 244 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 ZBTB25P24278 435 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 HERPUD1Q15011 391 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 MIDNQ504T8 468 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 ZNF626Q68DY1 528 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 GVQW1Q8N7I0 195 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 BEND2Q8NDZ0 799 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 OR52I2Q8NH67 350 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 MAFIPQ8WZ33 124 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 SNAPC3Q92966 411 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 LHX4Q969G2 390 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
NPHP4-205ENST00000466897 OR2S2Q9NQN1 319 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 HIVEP2P31629 2446 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 IGKV1-6A0A0C4DH72 117 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 RBBP9O75884 186 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 TBPP20226 339 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 NFYBP25208 207 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 TAS2R46P59540 309 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 DGCR2P98153 550 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 MORN2Q502X0 79 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 LINC00311Q8N616 119 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 GDPD1Q8N9F7 314 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 OR5AP2Q8NGF4 316 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 OR9G1Q8NH87 305 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 S100ZQ8WXG8 99 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 SUCNR1Q9BXA5 334 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 TAS2R8Q9NYW2 309 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 NUP50Q9UKX7 468 aa12.38□□□□□ -0.43
NPHP4-205ENST00000466897 NSD1Q96L73 2696 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-205ENST00000466897 MEIS3P1A6NDR6 274 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 PRRX1P54821 245 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 DLX1P56177 255 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 ARPC4P59998 168 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 KLRD1Q13241 179 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 IGSF11Q5DX21 431 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 PNKDQ8N490 385 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 ZNF439Q8NDP4 499 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 CREB3L1Q96BA8 519 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 NECAP2Q9NVZ3 263 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 KLK11Q9UBX7 282 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 SLC23A1Q9UHI7 598 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 PSG11Q9UQ72 335 aa12.37□□□□□ -0.43
NPHP4-205ENST00000466897 TBL2Q9Y4P3 447 aaKnown RBP12.37□□□□□ -0.43
NPHP4-205ENST00000466897 J3QR06 171 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 NPFFO15130 113 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 COX7A1P24310 79 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 SCGB2A2Q13296 93 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 GNMTQ14749 295 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 CDK10Q15131 360 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 LTC4SQ16873 150 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 TUSC1Q2TAM9 212 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 CHRFAM7AQ494W8 412 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 PYDC2Q56P42 97 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 MINOS1Q5TGZ0 78 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 SLC25A48Q6ZT89 311 aaKnown RBP12.36□□□□□ -0.43
NPHP4-205ENST00000466897 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 LYSMD2Q8IV50 215 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 Q8N402 240 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 EDARADDQ8WWZ3 215 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 DEDD2Q8WXF8 326 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 TRIM63Q969Q1 353 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 MMP28Q9H239 520 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 MINOS1-NBL1R4GNA1 71 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 NAV3Q8IVL0 2385 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 SVEP1Q4LDE5 3571 aa12.36□□□□□ -0.43
NPHP4-205ENST00000466897 IGHV3-43A0A0B4J1X8 118 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 TOR1AO14656 332 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 HSPA12AO43301 675 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 CSF1P09603 554 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 IGHV3-43DP0DP04 118 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
NPHP4-205ENST00000466897 RAB7AP51149 207 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 ZNF137PP52743 207 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 TAS2R19P59542 299 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 VAX1Q5SQQ9 334 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 UTF1Q5T230 341 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 OVCH2Q7RTZ1 564 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 H1FOOQ8IZA3 346 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-205ENST00000466897 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 TMEM229BQ8NBD8 167 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
NPHP4-205ENST00000466897 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms