RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 OR52L2PQ8NGH6 319 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 C4orf3Q8WVX3 66 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 OR5B12Q96R08 314 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 RASL11BQ9BPW5 248 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 MRPL20Q9BYC9 149 aaKnown RBP16.04■□□□□ 0.16
COL6A1-203ENST00000466285 ZNF107Q9UII5 783 aaPredicted RBP16.04■□□□□ 0.16
COL6A1-203ENST00000466285 WSB1Q9Y6I7 421 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 U3KQK5 164 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 ELANEP08246 267 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 FSTP19883 344 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 IL3RAP26951 378 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 SOX6P35712 828 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 NDPQ00604 133 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 JAGN1Q8N5M9 183 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 MYCBPQ99417 103 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-203ENST00000466285 ALX4Q9H161 411 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-203ENST00000466285 BABAM2Q9NXR7 383 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 TRAPPC2LQ9UL33 140 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 DIMT1Q9UNQ2 313 aaKnown RBP16.03■□□□□ 0.16
COL6A1-203ENST00000466285 FBXO7Q9Y3I1 522 aa16.03■□□□□ 0.16
COL6A1-203ENST00000466285 UBE2QL1A1L167 161 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 ATP6V0E1O15342 81 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 GPX5O75715 221 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 IGF1P05019 195 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 VDAC1P21796 283 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 DCKP27707 260 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 PPIFP30405 207 aaKnown RBP16.02■□□□□ 0.16
COL6A1-203ENST00000466285 PPP1CCP36873 323 aaKnown RBP16.02■□□□□ 0.16
COL6A1-203ENST00000466285 Q499Y3 187 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 C9orf66Q5T8R8 295 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 OR11H1Q8NG94 326 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 MRPL30Q8TCC3 161 aaKnown RBP16.02■□□□□ 0.16
COL6A1-203ENST00000466285 CASTOR1Q8WTX7 329 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 S100A13Q99584 98 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 KCNK15Q9H427 330 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 PEX16Q9Y5Y5 336 aa16.02■□□□□ 0.16
COL6A1-203ENST00000466285 MAS1P04201 325 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 OR3A3P47888 321 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 MMDQ15546 238 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 ZNF260Q3ZCT1 412 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 Q3ZCU0 254 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 AWAT2Q6E213 333 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 LAIR2Q6ISS4 152 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 TMPRSS11AQ6ZMR5 421 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 C10orf67Q8IYJ2 551 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 FAM46BQ96A09 425 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 Q96M66 194 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 RDH12Q96NR8 316 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 SELENOIQ9C0D9 397 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 TAF9BQ9HBM6 251 aa16.01■□□□□ 0.15
COL6A1-203ENST00000466285 SMPD3Q9NY59 655 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-203ENST00000466285 MCRIP1C9JLW8 97 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 I3L521 148 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 RAMP3O60896 148 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 SC5DO75845 299 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 MGMTP16455 207 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 INSL4Q14641 139 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 STX19Q8N4C7 294 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 NABP2Q9BQ15 211 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 PARP11Q9NR21 331 aa16■□□□□ 0.15
COL6A1-203ENST00000466285 PAK1IP1Q9NWT1 392 aaPredicted RBP16■□□□□ 0.15
COL6A1-203ENST00000466285 IGHV7-81A0A0B4J1V7 117 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 SPINT2O43291 252 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 TXNL1O43396 289 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 LANCL1O43813 399 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 SOX15O60248 233 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 ZNF780AO75290 641 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-203ENST00000466285 BLVRBP30043 206 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-203ENST00000466285 ACTBP60709 375 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 MORN2Q502X0 79 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 C6orf141Q5SZD1 244 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 C6orf183Q5T699 404 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 ZNF491Q8N8L2 437 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 OR8H1Q8NGG4 311 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 DERL3Q96Q80 235 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 ABHD14AQ9BUJ0 271 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 PARP12Q9H0J9 701 aaKnown RBP15.99■□□□□ 0.15
COL6A1-203ENST00000466285 MBNL3Q9NUK0 354 aaKnown RBP15.99■□□□□ 0.15
COL6A1-203ENST00000466285 ZNF256Q9Y2P7 627 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-203ENST00000466285 EXOSC1Q9Y3B2 195 aaKnown RBP15.99■□□□□ 0.15
COL6A1-203ENST00000466285 STARD9Q9P2P6 4700 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 SORL1Q92673 2214 aa15.99■□□□□ 0.15
COL6A1-203ENST00000466285 CRTAPO75718 401 aaPredicted RBP15.98■□□□□ 0.15
COL6A1-203ENST00000466285 GP2P55259 537 aaKnown RBP15.98■□□□□ 0.15
COL6A1-203ENST00000466285 YIF1BQ5BJH7 314 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 OR10K2Q6IF99 312 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 GGHQ92820 318 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 GON7Q9BXV9 100 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 ANKRD60Q9BZ19 345 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 OR2S2Q9NQN1 319 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 ZNF580Q9UK33 172 aa15.98■□□□□ 0.15
COL6A1-203ENST00000466285 SAA2-SAA4A0A096LPE2 208 aa15.97■□□□□ 0.15
COL6A1-203ENST00000466285 BAG2O95816 211 aa15.97■□□□□ 0.15
COL6A1-203ENST00000466285 IGLV1-40P01703 118 aa15.97■□□□□ 0.15
COL6A1-203ENST00000466285 SAA2P0DJI9 122 aaPredicted RBP15.97■□□□□ 0.15
COL6A1-203ENST00000466285 MYL12AP19105 171 aa15.97■□□□□ 0.15
COL6A1-203ENST00000466285 DCTN2Q13561 401 aaKnown RBP15.97■□□□□ 0.15
COL6A1-203ENST00000466285 LRRC36Q1X8D7 754 aa15.97■□□□□ 0.15
COL6A1-203ENST00000466285 C19orf54Q5BKX5 351 aa15.97■□□□□ 0.15
COL6A1-203ENST00000466285 FAM27D1Q5T7N8 215 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms