RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ACP7Q6ZNF0 438 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 C17orf107Q6ZR85 190 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 SGPP2Q8IWX5 399 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 C11orf53Q8IXP5 236 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 CCDC71LQ8N9Z2 235 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
HDAC6-215ENST00000465457 DYRK2Q92630 601 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 RDH5Q92781 318 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 RTBDNQ9BSG5 229 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-215ENST00000465457 C1orf123Q9NWV4 160 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 PIPOXQ9P0Z9 390 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 FZR1Q9UM11 496 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 PCDHB10Q9UN67 800 aa11.51□□□□□ -0.57
HDAC6-215ENST00000465457 WNK1Q9H4A3 2382 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 hCG_1807616A0A1W2PRN6 198 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 NPIPB11E5RHQ5 1161 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 ADH4P08319 380 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 FCGR2CP31995 323 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 ZNF81P51508 661 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 CYCSP99999 105 aaKnown RBP11.5□□□□□ -0.57
HDAC6-215ENST00000465457 PAX5Q02548 391 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 ABCA11PQ4W5N1 156 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
HDAC6-215ENST00000465457 C9orf62Q8N4C0 152 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 ADAD2Q8NCV1 583 aaKnown RBP11.5□□□□□ -0.57
HDAC6-215ENST00000465457 TMEM230Q96A57 120 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 CABLES2Q9BTV7 478 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 TMEM165Q9HC07 324 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 RAB18Q9NP72 206 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 TAAR3PQ9P1P4 343 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 IL19Q9UHD0 177 aa11.5□□□□□ -0.57
HDAC6-215ENST00000465457 TMEM30CPA0ZSE6 113 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 CRYM-AS1A6NIL9 109 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 ZSCAN5BA6NJL1 495 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 DBX1A6NMT0 343 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 LYNX1G3V0Z9 82 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 SIRPB1O00241 398 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 PPYP01298 95 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 LYNX1P0DP58 116 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 RBMXP38159 391 aaKnown RBP11.49□□□□□ -0.57
HDAC6-215ENST00000465457 DVL1P1P54792 670 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-215ENST00000465457 H2BFSP57053 126 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 SNRPD2P62316 118 aaKnown RBP11.49□□□□□ -0.57
HDAC6-215ENST00000465457 SRPXP78539 464 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 PRAMEF6Q5VXH4 476 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 TREML4Q6UXN2 200 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 ASCC1Q8N9N2 400 aaKnown RBP11.49□□□□□ -0.57
HDAC6-215ENST00000465457 PPP1R35Q8TAP8 253 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 PDCD10Q9BUL8 212 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 MRPL37Q9BZE1 423 aaKnown RBP11.49□□□□□ -0.57
HDAC6-215ENST00000465457 FXYD6Q9H0Q3 95 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 LPAR2Q9HBW0 351 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 COMMD9Q9P000 198 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 KCNIP3Q9Y2W7 256 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 WIPI2Q9Y4P8 454 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 HSPB11Q9Y547 144 aa11.49□□□□□ -0.57
HDAC6-215ENST00000465457 RYR3Q15413 4870 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 HMSDA8MTL9 139 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 SMLR1H3BR10 107 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 HSPB6O14558 160 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 CD55P08174 381 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 S100GP29377 79 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 SLC35E4Q6ICL7 350 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 VHLLQ6RSH7 139 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 GSG1LQ6UXU4 331 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 C1orf229Q6ZS94 237 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-215ENST00000465457 LRP11Q86VZ4 500 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 OR11L1Q8NGX0 322 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 GRPEL2Q8TAA5 225 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 Q8TCH9 128 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 CASTOR1Q8WTX7 329 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 GALNT14Q96FL9 552 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 OR2V2Q96R30 315 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 TMEM246Q9BRR3 403 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 SUCNR1Q9BXA5 334 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
HDAC6-215ENST00000465457 KCNIP1Q9NZI2 227 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 TRAPPC2LQ9UL33 140 aa11.48□□□□□ -0.57
HDAC6-215ENST00000465457 TRBV6-7A0A0A0MS04 114 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 TEX13DA0A0J9YY54 714 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-215ENST00000465457 B3GALNT1O75752 331 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 TUSC2O75896 110 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 DAOP14920 347 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 RPS2P15880 293 aaKnown RBP11.47□□□□□ -0.57
HDAC6-215ENST00000465457 TNFRSF1AP19438 455 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 AADACP22760 399 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 RND3P61587 244 aa11.47□□□□□ -0.57
HDAC6-215ENST00000465457 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms