RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 OR10X1Q8NGY0 326 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 GCDHQ92947 438 aaPredicted RBP11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 GALMQ96C23 342 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 ABCB10Q9NRK6 738 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 MGAT4AQ9UM21 535 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 SPATA2Q9UM82 520 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 AMMECR1Q9Y4X0 333 aaPredicted RBP11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 A0A1W2PPE3 182 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 TMEM89A2RUT3 159 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 GPR137BO60478 399 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 HKR1P10072 659 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 RPL5P46777 297 aaKnown RBP11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 DYNLT3P51808 116 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 LY6EQ16553 131 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 CDNFQ49AH0 187 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 LINC00311Q8N616 119 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 OR52L2PQ8NGH6 319 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 OR10V1Q8NGI7 309 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 PIFOQ8TCI5 191 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 PHF21AQ96BD5 680 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 SLC25A38Q96DW6 304 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 Q9N2K0 584 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 JPT1Q9UK76 154 aa11.71□□□□□ -0.53
SQSTM1-205ENST00000464493 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 TALDO1P37837 337 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 ARHGDIBP52566 201 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF134P52741 427 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 ARFRP1Q13795 201 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 MORN2Q502X0 79 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 STEAP3Q658P3 488 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 RPEQ96AT9 228 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 OCSTAMPQ9BR26 566 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 SCOCQ9UIL1 159 aa11.7□□□□□ -0.54
SQSTM1-205ENST00000464493 YPEL1O60688 119 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 RGS11O94810 467 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 FCGR3AP08637 254 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 GSTP1P09211 210 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 BRS3P32247 399 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 PPP1CCP36873 323 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 RORCP51449 518 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 HLA-DRB3P79483 266 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 GNMTQ14749 295 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF260Q3ZCT1 412 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 CT45A1Q5HYN5 189 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 HACD4Q5VWC8 232 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 CLVS1Q8IUQ0 354 aaPredicted RBP11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF439Q8NDP4 499 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 CT45A3Q8NHU0 189 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 SPATA3Q8NHX4 192 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 TAF15Q92804 592 aaKnown RBP eCLIP11.69□□□□□ -0.544e-7■□□□□ 10.7
SQSTM1-205ENST00000464493 TOMM40LQ969M1 308 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 YPEL2Q96QA6 119 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 DCSTAMPQ9H295 470 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 DIABLOQ9NR28 239 aa11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
SQSTM1-205ENST00000464493 STAB1Q9NY15 2570 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 A0A0A6YYH2 397 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 A6NJ64 397 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 TRDCB7Z8K6 153 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 SLC31A2O15432 143 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 SCTP09683 121 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 IL3RAP26951 378 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 MNDAP41218 407 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 COMPP49747 757 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 RAB7AP51149 207 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 FOXL1Q12952 345 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 DIAPH2-AS1Q14236 149 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 UBE2NLQ5JXB2 153 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 LY6G6FQ5SQ64 297 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 SAMD12Q8N8I0 201 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 S100A16Q96FQ6 103 aaKnown RBP11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 ABCG5Q9H222 651 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 RAB18Q9NP72 206 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 C1RLQ9NZP8 487 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF230Q9UIE0 474 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 PITPNC1Q9UKF7 332 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 TCF19Q9Y242 345 aa11.68□□□□□ -0.54
SQSTM1-205ENST00000464493 TRAV18A0A075B6X5 111 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 A6NDX4 124 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 GAPDHP04406 335 aaKnown RBP11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 ZBTB25P24278 435 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 KIR2DS4P43632 304 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 TMBIM6P55061 237 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 PITPNAQ00169 270 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 KIR2DS1Q14954 304 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 SRSF7Q16629 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 PNLIPRP3Q17RR3 467 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 DHRS7BQ6IAN0 325 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms