RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ACSM3Q53FZ2 586 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 PDZD11Q5EBL8 140 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ACSBG2Q5FVE4 666 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TPRG1LQ5T0D9 272 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 AKR1C8PQ5T2L2 129 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 IDNKQ5T6J7 187 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 HIST2H3PS2Q5TEC6 136 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SAMD13Q5VXD3 122 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SAXO2Q658L1 398 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 GLYATQ6IB77 296 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 EIF5AL1Q6IS14 154 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF880Q6PDB4 577 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SHISA6Q6ZSJ9 500 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TCF24Q7RTU0 167 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 S100A7AQ86SG5 101 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 BOD1L2Q8IYS8 172 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SVBPQ8N300 66 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 LRRC52Q8N7C0 313 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 UBAC2Q8NBM4 344 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 INO80EQ8NBZ0 244 aaPredicted RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 OR4E2Q8NGC2 313 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 OR6N1Q8NGY5 312 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 OR10A6Q8NH74 314 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 OR5AK3PQ8NH89 298 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ASB13Q8WXK3 278 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ACOT12Q8WYK0 555 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 RORBQ92753 470 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 GHSRQ92847 366 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 MAGOHBQ96A72 148 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TLCD1Q96CP7 247 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CPNE2Q96FN4 548 aaPredicted RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TBL1YQ9BQ87 522 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 GINS4Q9BRT9 223 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 RSG1Q9BU20 258 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CCDC32Q9BV29 185 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 UGT2B28Q9BY64 529 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TBL1XR1Q9BZK7 514 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 NKX6-2Q9C056 277 aaPredicted RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF436Q9C0F3 470 aaPredicted RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SLIRPQ9GZT3 109 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 BOLA2Q9H3K6 86 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CXorf21Q9HAI6 301 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 PLEKHJ1Q9NW61 149 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SCN3BQ9NY72 215 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 RASL12Q9NYN1 266 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TAS2R13Q9NYV9 303 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM216Q9P0N5 145 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 MRM2Q9UI43 246 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SNX12Q9UMY4 172 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 FARSAQ9Y285 508 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 YARS2Q9Y2Z4 477 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 KPTNQ9Y664 436 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 DISP1Q96F81 1524 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 DUOX2Q9NRD8 1548 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 IQGAP2Q13576 1575 aa2.15□□□□□ -2.06
HMGXB4-205ENST00000464480 CDK12Q9NYV4 1490 aaPredicted RBP2.15□□□□□ -2.06
HMGXB4-205ENST00000464480 TRAV8-7A0A075B6U6 113 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 A0A096LPI6 279 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 TRAV40A0A0B4J280 105 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM72A0PK05 275 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 ARL5CA6NH57 179 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 F6UZH7 168 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 H0Y980 276 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 AIPO00170 330 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 NME4O00746 187 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 RFXANKO14593 260 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 PDE6DO43924 150 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 HSBP1O75506 76 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 ADAP1O75689 374 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 PIAS1O75925 651 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 MT-ND4P03905 459 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 GYPCP04921 128 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 CD5P06127 495 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 CD2P06729 351 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 HTR1AP08908 422 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 PGA5P0DJD9 388 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 RAB5AP20339 215 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 HTR1DP28221 377 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 PMELP40967 661 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 NBL1P41271 181 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 PPICP45877 212 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 MAP2K4P45985 399 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 GPR1P46091 355 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 CXCL12P48061 93 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 PIGPP57054 158 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 TAS2R46P59540 309 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 RPL23P62829 140 aaKnown RBP2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 CACNG7P62955 275 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 EMX1Q04741 257 aaPredicted RBP2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 RBMY1FQ15415 496 aaKnown RBP2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 RPEL1Q2QD12 228 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 ARHGAP11BQ3KRB8 267 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM176BQ3YBM2 270 aaPredicted RBP2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 COL5A1-AS1Q5SY13 56 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 SYT6Q5T7P8 510 aaPredicted RBP2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 APOBEC3HQ6NTF7 200 aaKnown RBP2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 SCIMPQ6UWF3 145 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 TEX261Q6UWH6 196 aa2.15□□□□□ -2.07
HMGXB4-205ENST00000464480 BAP18Q8IXM2 172 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms