RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PARP11Q9NR21 331 aa13.37□□□□□ -0.27
HMGN1-210ENST00000464078 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
HMGN1-210ENST00000464078 IGHV7-81A0A0B4J1V7 117 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 HBZP02008 142 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 GTF2F2P13984 249 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 CRIP2P52943 208 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-210ENST00000464078 PPP3R1P63098 170 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 RAB40BQ12829 278 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 CCDC58Q4VC31 144 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 SYT6Q5T7P8 510 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-210ENST00000464078 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 OR6Q1Q8NGQ2 317 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 DLX4Q92988 240 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-210ENST00000464078 S100A13Q99584 98 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 GAR1Q9NY12 217 aaKnown RBP13.36□□□□□ -0.27
HMGN1-210ENST00000464078 ING4Q9UNL4 249 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 MRPS28Q9Y2Q9 187 aaKnown RBP13.36□□□□□ -0.27
HMGN1-210ENST00000464078 STARD9Q9P2P6 4700 aa13.36□□□□□ -0.27
HMGN1-210ENST00000464078 TRIM64CA6NLI5 447 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 LINC01619G3V211 115 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 EI24O14681 340 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 NBR2O15453 112 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 CA11O75493 328 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 BLVRBP30043 206 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-210ENST00000464078 BDKRB2P30411 391 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 GABPB1Q06547 395 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-210ENST00000464078 C5orf64Q2M2E5 130 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 ZNF554Q86TJ5 538 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 OR10V1Q8NGI7 309 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 OR1L1Q8NH94 360 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 MRPS24Q96EL2 167 aaKnown RBP13.35□□□□□ -0.27
HMGN1-210ENST00000464078 ANKRD60Q9BZ19 345 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 GHITMQ9H3K2 345 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 AASSQ9UDR5 926 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 TRAPPC2LQ9UL33 140 aa13.35□□□□□ -0.27
HMGN1-210ENST00000464078 A0A1W2PP11 408 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 SC5DO75845 299 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 LGALS1P09382 135 aaKnown RBP13.34□□□□□ -0.27
HMGN1-210ENST00000464078 LIMS3P0CW19 117 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 LIMS4P0CW20 117 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 ALDH3A2P51648 485 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 GTF2A1P52655 376 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-210ENST00000464078 GPR176Q14439 515 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 SLC22A6Q4U2R8 563 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 RPL22L1Q6P5R6 122 aaKnown RBP13.34□□□□□ -0.27
HMGN1-210ENST00000464078 LYPD6Q86Y78 171 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 TCTEX1D1Q8N7M0 179 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 NPBQ8NG41 125 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 ISOC1Q96CN7 298 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 Q96MT0 163 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 CST11Q9H112 138 aa13.34□□□□□ -0.27
HMGN1-210ENST00000464078 ALX4Q9H161 411 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-210ENST00000464078 MRPS18AQ9NVS2 196 aaKnown RBP13.34□□□□□ -0.27
HMGN1-210ENST00000464078 MAGEA13PA6NCF6 341 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 A8MZ25 164 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 MCRIP1C9JLW8 97 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 LDLRAD4O15165 306 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 SOX15O60248 233 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 NDUFA3O95167 84 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 CNTFRP26992 372 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 SLURP1P55000 103 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 NDPQ00604 133 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 RIPK1Q13546 671 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 MORN2Q502X0 79 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 XAF1Q6GPH4 301 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 RAB12Q6IQ22 244 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 ODF3L1Q8IXM7 274 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 OR52I1Q8NGK6 324 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 OR4K15Q8NH41 348 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 RHOXF1Q8NHV9 184 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 ARPC1AQ92747 370 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 RITA1Q96K30 269 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 ZNF184Q99676 751 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-210ENST00000464078 NABP2Q9BQ15 211 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 ABHD14AQ9BUJ0 271 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 MRPL20Q9BYC9 149 aaKnown RBP13.33□□□□□ -0.28
HMGN1-210ENST00000464078 MBNL3Q9NUK0 354 aaKnown RBP13.33□□□□□ -0.28
HMGN1-210ENST00000464078 ETAA1Q9NY74 926 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 JPT1Q9UK76 154 aa13.33□□□□□ -0.28
HMGN1-210ENST00000464078 FOXA2Q9Y261 457 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-210ENST00000464078 IGHV4OR15-8A0A075B7B6 117 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 A0A087WW49 117 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 GPX5O75715 221 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 IGFBP3P17936 291 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-210ENST00000464078 RCC1P18754 421 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-210ENST00000464078 VEGFCP49767 419 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 RASSF2P50749 326 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 ADARB1P78563 741 aaKnown RBP13.32□□□□□ -0.28
HMGN1-210ENST00000464078 ZIK1Q3SY52 487 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-210ENST00000464078 LY6G6FQ5SQ64 297 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 ZFAND6Q6FIF0 208 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 LIN54Q6MZP7 749 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 ZNF833PQ6ZTB9 187 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 PRR18Q8N4B5 295 aa13.32□□□□□ -0.28
HMGN1-210ENST00000464078 TAF9BQ9HBM6 251 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms