RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CD28P10747 220 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 RAB7AP51149 207 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 TMEM50BP56557 158 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 RAB11BQ15907 218 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 C2orf76Q3KRA6 126 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 HES5Q5TA89 166 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 SLC25A48Q6ZT89 311 aaKnown RBP10.33□□□□□ -0.76
XRN1-203ENST00000463916 C16orf82Q7Z2V1 217 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 THNSL2Q86YJ6 484 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 OR52L2PQ8NGH6 319 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 FAM3DQ96BQ1 224 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 Q9H521 79 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 OR2S2Q9NQN1 319 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 LRRC42Q9Y546 428 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 V9GY05 133 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 IGHV1-3A0A0C4DH29 117 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 TRDV1A0A1B0GX56 115 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 ZNF736B4DX44 427 aaPredicted RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 H3BUI4 141 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 LDLRAD4O15165 306 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 MRPS14O60783 128 aaKnown RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 NAPSAO96009 420 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 ZNF816Q0VGE8 651 aaPredicted RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 MORN2Q502X0 79 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 OR2W3Q7Z3T1 314 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 NR2C2APQ86WQ0 139 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 OR8H3Q8N146 312 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 DTX3Q8N9I9 347 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 HDHD3Q9BSH5 251 aaPredicted RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 MMP27Q9H306 513 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 TRAV1-2A0A0B4J238 106 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 IGKV1D-33P01593 117 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 IGKV1-33P01594 117 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 GAPDHP04406 335 aaKnown RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 VDAC2P45880 294 aaPredicted RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 HES1Q14469 280 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 C22orf42Q6IC83 251 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 TRAT1Q6PIZ9 186 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 MOB3BQ86TA1 216 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 SVOPQ8N4V2 548 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 FAM110DQ8TAY7 271 aaPredicted RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 RTN4IP1Q8WWV3 396 aaPredicted RBP10.32□□□□□ -0.76
XRN1-203ENST00000463916 AKR1E2Q96JD6 320 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 PLEKHJ1Q9NW61 149 aa10.32□□□□□ -0.76
XRN1-203ENST00000463916 TMEM272A0A1B0GTI8 110 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 PSMB9P28065 219 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 PPP1CCP36873 323 aaKnown RBP10.31□□□□□ -0.76
XRN1-203ENST00000463916 VEGFCP49767 419 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 Q3ZCU0 254 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 ARSJQ5FYB0 599 aaPredicted RBP10.31□□□□□ -0.76
XRN1-203ENST00000463916 URM1Q9BTM9 101 aaKnown RBP10.31□□□□□ -0.76
XRN1-203ENST00000463916 YTHDF1Q9BYJ9 559 aaKnown RBP10.31□□□□□ -0.76
XRN1-203ENST00000463916 KCNIP1Q9NZI2 227 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 STEAP1Q9UHE8 339 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 AK3Q9UIJ7 227 aa10.31□□□□□ -0.76
XRN1-203ENST00000463916 A0A0B4J203 849 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 SMIM30A4D0T7 59 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 TMEM11P17152 192 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 HMGN3Q15651 99 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 C2orf68Q2NKX9 166 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 PLAC9Q5JTB6 97 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ZNF880Q6PDB4 577 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 C10orf99Q6UWK7 81 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ZNF554Q86TJ5 538 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ARHGAP5-AS1Q96IT6 56 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
XRN1-203ENST00000463916 IFITM5A6NNB3 132 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 PEX14O75381 377 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 FBXO24O75426 580 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 CSF1P09603 554 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 PSMD7P51665 324 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ZNF137PP52743 207 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 HTD2P86397 168 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 EBI3Q14213 229 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 TCTEX1D4Q5JR98 221 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 EAF1Q96JC9 268 aaPredicted RBP10.3□□□□□ -0.76
XRN1-203ENST00000463916 RAB9BQ9NP90 201 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 KCNK7Q9Y2U2 307 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 MOB4Q9Y3A3 225 aa10.3□□□□□ -0.76
XRN1-203ENST00000463916 GALP22466 123 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 NSUN5P1Q3KNT7 163 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 MOGAT2Q3SYC2 334 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 C9orf152Q5JTZ5 239 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 STEAP3Q658P3 488 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 Q8N6K4 173 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 OR5AU1Q8NGC0 362 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 SETD6Q8TBK2 473 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 IL1F10Q8WWZ1 152 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 GALMQ96C23 342 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 PECRQ9BY49 303 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 CHMP1AQ9HD42 196 aaPredicted RBP10.29□□□□□ -0.76
XRN1-203ENST00000463916 TXNL4BQ9NX01 149 aaKnown RBP10.29□□□□□ -0.76
XRN1-203ENST00000463916 JPT1Q9UK76 154 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
XRN1-203ENST00000463916 RAB3BP20337 219 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms