RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PLSCR3Q9NRY6 295 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 RAB26Q9ULW5 256 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 CA11O75493 328 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 SC5DO75845 299 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 MAPK3P27361 379 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-205ENST00000463818 GPR12P47775 334 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 THBS3P49746 956 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 KRTAP10-11P60412 298 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 INSL4Q14641 139 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 TMEM30BQ3MIR4 351 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 ACSM3Q53FZ2 586 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 TRAT1Q6PIZ9 186 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 UNQ9370/PRO34162Q6UXP9 181 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 ETV3LQ6ZN32 361 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 NKAIN3Q8N8D7 197 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 THRSPQ92748 146 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 RBMXL1Q96E39 390 aaKnown RBP14.86□□□□□ -0.03
SF3A1-205ENST00000463818 DUSP21Q9H596 190 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 TAF9BQ9HBM6 251 aa14.86□□□□□ -0.03
SF3A1-205ENST00000463818 LIN7CQ9NUP9 197 aaKnown RBP14.86□□□□□ -0.03
SF3A1-205ENST00000463818 NUDT19A8MXV4 375 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 AP4M1O00189 453 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 CDK1P06493 297 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 STEAP3Q658P3 488 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 C8orf86Q6ZUL3 223 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 C5orf24Q7Z6I8 188 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 FAM46BQ96A09 425 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 S1PR3Q99500 378 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 RASL11BQ9BPW5 248 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 KCNIP1Q9NZI2 227 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 GHRLQ9UBU3 117 aa14.85□□□□□ -0.03
SF3A1-205ENST00000463818 PTGES3LE9PB15 166 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 K7EIL1 84 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 PDCD6O75340 191 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 MYCNOSP40205 109 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 ZNF137PP52743 207 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 F2RL1P55085 397 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 GP2P55259 537 aaKnown RBP14.84□□□□□ -0.03
SF3A1-205ENST00000463818 GPR50Q13585 617 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 PNLIPRP3Q17RR3 467 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 MORN2Q502X0 79 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 TEX38Q6PEX7 206 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 MS4A15Q8N5U1 240 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 OR52L2PQ8NGH6 319 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 OR2S2Q9NQN1 319 aa14.84□□□□□ -0.03
SF3A1-205ENST00000463818 MBNL3Q9NUK0 354 aaKnown RBP14.84□□□□□ -0.03
SF3A1-205ENST00000463818 TXNL1O43396 289 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 SLC6A1P30531 599 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 HOXD3P31249 432 aaPredicted RBP14.83□□□□□ -0.04
SF3A1-205ENST00000463818 IRF3Q14653 427 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 NKAPLQ5M9Q1 402 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 FAM27D1Q5T7N8 215 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 KLHL30-AS1Q8NEE0 82 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 OR8H1Q8NGG4 311 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 MRPL30Q8TCC3 161 aaKnown RBP14.83□□□□□ -0.04
SF3A1-205ENST00000463818 NEDD4LQ96PU5 975 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 MND1Q9BWT6 205 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 CST11Q9H112 138 aa14.83□□□□□ -0.04
SF3A1-205ENST00000463818 WI2-2373I1.2A0A1W2PRP0 233 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 LANCL1O43813 399 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 UBBP0CG47 229 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 CRHBPP24387 322 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 DEFB121Q5J5C9 76 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 GLT8D1Q68CQ7 371 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 OR10K2Q6IF99 312 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 ZNF554Q86TJ5 538 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 LRRTM1Q86UE6 522 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 ZNF695Q8IW36 515 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 TMED9Q9BVK6 235 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 GON7Q9BXV9 100 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 GPR61Q9BZJ8 451 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 SCN3BQ9NY72 215 aa14.82□□□□□ -0.04
SF3A1-205ENST00000463818 LSM2Q9Y333 95 aaKnown RBP14.82□□□□□ -0.04
SF3A1-205ENST00000463818 RPLP1P05386 114 aaKnown RBP14.81□□□□□ -0.04
SF3A1-205ENST00000463818 VSIG8P0DPA2 414 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 PPP1CCP36873 323 aaKnown RBP14.81□□□□□ -0.04
SF3A1-205ENST00000463818 EGFEM1PQ0D2K5 195 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 GNMTQ14749 295 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 SPHARQ15513 63 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 C1orf100Q5SVJ3 147 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 LCNL1Q6ZST4 164 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 CEACAM19Q7Z692 300 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 FAM71E2Q8N5Q1 922 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 P2RX4Q99571 388 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 HSPB9Q9BQS6 159 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 SULT4A1Q9BR01 284 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 FAAP24Q9BTP7 215 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 TPRKBQ9Y3C4 175 aa14.81□□□□□ -0.04
SF3A1-205ENST00000463818 DENRO43583 198 aaKnown RBP14.8□□□□□ -0.04
SF3A1-205ENST00000463818 SRMP19623 302 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 CHATP28329 748 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 SOX6P35712 828 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 HTD2P86397 168 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 LSAMPQ13449 338 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 RBM48Q5RL73 367 aaKnown RBP14.8□□□□□ -0.04
SF3A1-205ENST00000463818 PHYHIPQ92561 330 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 DPF1Q92782 380 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 RAX2Q96IS3 184 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 DUX3Q96PT4 197 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 ABHD14AQ9BUJ0 271 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms