RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 WDYHV1Q96HA8 205 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 CYYR1Q96J86 154 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 LMLNQ96KR4 655 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF681Q96N22 645 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 TSPAN32Q96QS1 320 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 OR4F4Q96R69 305 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 NMNAT3Q96T66 252 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 PYGO2Q9BRQ0 406 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 SPXQ9BT56 116 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 RTN4RQ9BZR6 473 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 AKIRIN1Q9H9L7 192 aaPredicted RBP3.1□□□□□ -1.91
COL8A1-205ENST00000463753 C1orf123Q9NWV4 160 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 B4GALT7Q9UBV7 327 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF835Q9Y2P0 537 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 U3KQE9 123 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 ARL2-SNX15V9GYD0 113 aa3.1□□□□□ -1.91
COL8A1-205ENST00000463753 WIPF3A6NGB9 483 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 NPIPB15A6NHN6 443 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 H3BUT2 72 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 HMGB3O15347 200 aaKnown RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 CST7O76096 145 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 TSPAN13O95857 204 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 MT-ATP6P00846 226 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 HBE1P02100 147 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 APOA2P02652 100 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 SERPINE2P07093 398 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 C3orf79P0CE67 100 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 CEBPBP17676 345 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 USF1P22415 310 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 GDF1P27539 372 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 SLC6A12P48065 614 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 LHX2P50458 406 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 RRADP55042 308 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PIGPP57054 158 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 LINC00310P59036 64 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 LILRA4P59901 499 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PPP1CBP62140 327 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ARG2P78540 354 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 POU3F1Q03052 451 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 DCAF4L1Q3SXM0 396 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PLCXD3Q63HM9 321 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 FAM71E1Q6IPT2 247 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 FBXL22Q6P050 247 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 BHLHA9Q7RTU4 235 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ADGRE4PQ86SQ3 457 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PRR22Q8IZ63 422 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 LGI3Q8N145 548 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 C2orf73Q8N5S3 287 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 DEFB125Q8N687 156 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ZIC4Q8N9L1 334 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 OR10P1Q8NGE3 313 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 OR13G1Q8NGZ3 307 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 OR5B3Q8NH48 314 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 CT55Q8WUE5 264 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 GLYATL1Q969I3 302 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PPP1R14AQ96A00 147 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 RAB37Q96AX2 223 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 TNFRSF13CQ96RJ3 184 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PSMG3Q9BT73 122 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ST6GALNAC5Q9BVH7 336 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 CENPMQ9NSP4 180 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 LHX3Q9UBR4 397 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 RALYQ9UKM9 306 aaKnown RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 GPR132Q9UNW8 380 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 B3GALT1Q9Y5Z6 326 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PXMP4Q9Y6I8 212 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 R4GN57 208 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 DOCK8Q8NF50 2099 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 A0A087X0K7 114 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 DUXBA0A1W2PPF3 345 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 MYADML2A6NDP7 307 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 GYPAP02724 150 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 TACSTD2P09758 323 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 IGLL1P15814 213 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF17P17021 662 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PGCP20142 388 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 CA7P43166 264 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 EWSR1Q01844 656 aaKnown RBP eCLIP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PDE7AQ13946 482 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PDGFRLQ15198 375 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ACKR1Q16570 336 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ANXA2RQ3ZCQ2 193 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 CD300EQ496F6 205 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 TRMT12Q53H54 448 aaKnown RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 TCTEX1D4Q5JR98 221 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PHF19Q5T6S3 580 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 PLPPR4Q7Z2D5 763 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 KRTAP1-3Q8IUG1 177 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 SPACA3Q8IXA5 215 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 C9orf40Q8IXQ3 194 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 UMODL1-AS1Q8N2C9 162 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ARHGEF39Q8N4T4 335 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 OR8G5Q8NG78 346 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ZPLD1Q8TCW7 415 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 OR5P2Q8WZ92 322 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF764Q96H86 408 aaPredicted RBP3.09□□□□□ -1.91
COL8A1-205ENST00000463753 FER1L6-AS2Q96M78 137 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 C16orf70Q9BSU1 422 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 LINC00470Q9BZP3 86 aa3.09□□□□□ -1.91
COL8A1-205ENST00000463753 STRADBQ9C0K7 418 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms