RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 KCNE3Q9Y6H6 103 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 CCDC144AA2RUR9 1427 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 PTPRKQ15262 1439 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 CEP170Q5SW79 1584 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 DNMBPQ6XZF7 1577 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 ITSN1Q15811 1721 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 DOT1LQ8TEK3 1739 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 NUP205Q92621 2012 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 PTPRJQ12913 1337 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 MROH5Q6ZUA9 1318 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 NRCAMQ92823 1304 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 PXDNQ92626 1479 aa-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 BAZ1BQ9UIG0 1483 aaKnown RBP-0.93□□□□□ -2.56
TMEM56-204ENST00000463375 CHD5Q8TDI0 1954 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 LMO7Q8WWI1 1683 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 MAGI3Q5TCQ9 1506 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 EIF3AQ14152 1382 aaKnown RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 MTUS2Q5JR59 1369 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 TNIKQ9UKE5 1360 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CEP152O94986 1710 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SPHKAPQ2M3C7 1700 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 IGHV3-43A0A0B4J1X8 118 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CCL15-CCL14A0A0B4J2E2 113 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 A0A0D9SFI3 127 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 A0A0U1RQV5 110 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 A0A1B0GVL5 298 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CLDN24A6NM45 220 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 APOC4-APOC2K7ER74 178 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 DYNC1I1O14576 645 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CLDN3O15551 220 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SSX5O60225 188 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 FMO6PO60774 539 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SPAG6O75602 509 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CRTAPO75718 401 aaPredicted RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 POP7O75817 140 aaKnown RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ATP5LO75964 103 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR2J2O76002 312 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 FARS2O95363 451 aaKnown RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 PTBP3O95758 552 aaKnown RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CD160O95971 181 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CRYGDP07320 174 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CCL3P10147 92 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 TROVE2P10155 538 aaKnown RBP eCLIP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 COX6A1P12074 109 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 HMGA1P17096 107 aaKnown RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 PPICP45877 212 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 EMP1P54849 157 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR4D2P58180 307 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ROMO1P60602 79 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ERVS71-1P61550 626 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 FKBP1AP62942 108 aaKnown RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 KCNJ2P63252 427 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 MXD1Q05195 221 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 KDSRQ06136 332 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 PNOCQ13519 176 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SCARB2Q14108 478 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 RCAN2Q14206 197 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CDK5R1Q15078 307 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 PDGFRLQ15198 375 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR7A5Q15622 319 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 INAQ16352 499 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CCL15Q16663 113 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 LINC00303Q3SY05 128 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ZNF404Q494X3 552 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ACTBL2Q562R1 376 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 TTMPQ5BVD1 217 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 MESTQ5EB52 335 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 TPRG1LQ5T0D9 272 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 FAM27D1Q5T7N8 215 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CLEC6AQ6EIG7 209 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 LRRC8BQ6P9F7 803 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 COA5Q86WW8 74 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 GKN2Q86XP6 184 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SNX29P2Q8IUI4 249 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CBLN2Q8IUK8 224 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 NUDCD3Q8IVD9 361 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 MSRB3Q8IXL7 192 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 CPNE9Q8IYJ1 553 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ZFP82Q8N141 532 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 C20orf197Q8N268 126 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 TEX9Q8N6V9 391 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ZNF676Q8N7Q3 588 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SPERTQ8NA61 448 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 FER1L6-AS1Q8NA97 138 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR10X1Q8NGY0 326 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR10G6Q8NH81 332 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR1F12Q8NHA8 337 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SPPL2BQ8TCT7 592 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 RXFP4Q8TDU9 374 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 ASB17Q8WXJ9 295 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 KIFAP3Q92845 792 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SNX21Q969T3 373 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 GPR146Q96CH1 333 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 RNF170Q96K19 258 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 C4orf36Q96KX1 117 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 Q96M85 177 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 SPRR4Q96PI1 79 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 OR4K3Q96R72 315 aa-0.94□□□□□ -2.56
TMEM56-204ENST00000463375 PEBP4Q96S96 227 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms