RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CDH20Q9HBT6 801 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 LYZL6O75951 148 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 IFNA5P01569 189 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 IGKV1-39P01597 117 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 IGKV1D-39P04432 117 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 FBP1P09467 338 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 CBR1P16152 277 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 ZNF14P17017 642 aaPredicted RBP14.34□□□□□ -0.11
ACTB-207ENST00000462494 MDH2P40926 338 aaKnown RBP14.34□□□□□ -0.11
ACTB-207ENST00000462494 MRPL49Q13405 166 aaKnown RBP14.34□□□□□ -0.11
ACTB-207ENST00000462494 RNF212Q495C1 297 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 ZNF497Q6ZNH5 498 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 OR14J1Q9UGF5 321 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 TXNL1O43396 289 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 RAB5AP20339 215 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 CEACAM6P40199 344 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 EIF2S3LQ2VIR3 472 aaKnown RBP14.34□□□□□ -0.11
ACTB-207ENST00000462494 ADAM5Q6NVV9 412 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 ZNF295-AS1Q8N0V1 137 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 ZNF561Q8N587 486 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 SMDT1Q9H4I9 107 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 KIAA1456Q9P272 454 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 POLDIP2Q9Y2S7 368 aa14.34□□□□□ -0.11
ACTB-207ENST00000462494 BTBD17A6NE02 478 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 M0R296 226 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 DFFBO76075 338 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 IFNA4P05014 189 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 CEBPDP49716 269 aaPredicted RBP14.33□□□□□ -0.12
ACTB-207ENST00000462494 TAS2R30P59541 319 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 TLE4Q04727 773 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 OR8G1Q15617 311 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 PLA2G2CQ5R387 149 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 SLC25A40Q8TBP6 338 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 RAB40CQ96S21 281 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 KIAA1324LA8MWY0 1029 aaPredicted RBP14.33□□□□□ -0.12
ACTB-207ENST00000462494 H0YL77 283 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.33□□□□□ -0.12
ACTB-207ENST00000462494 EIF3GO75821 320 aaKnown RBP eCLIP14.33□□□□□ -0.126e-9■■■□□ 16.1
ACTB-207ENST00000462494 METTL15P1P0C7V9 234 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 MOB1BQ7L9L4 216 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 Q8IYB0 196 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 OR8G5Q8NG78 346 aa14.33□□□□□ -0.12
ACTB-207ENST00000462494 A0A1W2PPE3 182 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 NPIPB11E5RHQ5 1161 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 SH2D1BO14796 132 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 SYNGR2O43760 224 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 OR2C1O95371 312 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 IGKV1-5P01602 117 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 SLC25A6P12236 298 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 CEACAM1P13688 526 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 IGHV1-2P23083 117 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 MEOX2P50222 304 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 OR2B8PP59922 312 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 KIAA2026Q5HYC2 2103 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 CXorf67Q86X51 503 aaPredicted RBP14.32□□□□□ -0.12
ACTB-207ENST00000462494 RSG1Q9BU20 258 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 PSENENQ9NZ42 101 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 TREM2Q9NZC2 230 aa14.32□□□□□ -0.12
ACTB-207ENST00000462494 PIGBOS1A0A0B4J2F0 54 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 H3BQ15 152 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 SRP19P09132 144 aaKnown RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 AGAP20933 346 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 RAB2AP61019 212 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 ERVK11-1P61568 191 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 TGFBR3Q03167 851 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 ICAM4Q14773 271 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 TMEM178AQ8NBL3 297 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 SCGB1C1Q8TD33 95 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 GMPPAQ96IJ6 420 aaPredicted RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 UNKLQ9H9P5 680 aaKnown RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 LIN7CQ9NUP9 197 aaKnown RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 WSB1Q9Y6I7 421 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 LOC400499M0QZD8 3231 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 SCAF4O95104 1147 aaKnown RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 PGA5P0DJD9 388 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 RPS23P62266 143 aaKnown RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 FAM180AQ6UWF9 173 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 CYB561D1Q8N8Q1 229 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 LSM10Q969L4 123 aaKnown RBP14.31□□□□□ -0.12
ACTB-207ENST00000462494 OBP2BQ9NPH6 170 aa14.31□□□□□ -0.12
ACTB-207ENST00000462494 ZNF727A8MUV8 499 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 HOXA4Q00056 320 aaPredicted RBP14.3□□□□□ -0.12
ACTB-207ENST00000462494 PSG7Q13046 419 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 ZNF585BQ52M93 769 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 TRIB1Q96RU8 372 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 ZDHHC11Q9H8X9 412 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 TINAGQ9UJW2 476 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 RNF150Q9ULK6 438 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 C5orf52A6NGY3 159 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 ATXN7O15265 892 aaPredicted RBP14.3□□□□□ -0.12
ACTB-207ENST00000462494 HBE1P02100 147 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 TAGLN2P37802 199 aaKnown RBP14.3□□□□□ -0.12
ACTB-207ENST00000462494 UBE2KP61086 200 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 ARL16Q0P5N6 197 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 ZNF429Q86V71 674 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 DRAM1Q8N682 238 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 CNEP1R1Q8N9A8 125 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 CLDND2Q8NHS1 167 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 RAB39BQ96DA2 213 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 RBMXL1Q96E39 390 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms