RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 C6orf183Q5T699 404 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 DMKNQ6E0U4 476 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-204ENST00000462475 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 GAPTQ8N292 157 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 PQLC1Q8N2U9 271 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 JAGN1Q8N5M9 183 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 PGLYRP3Q96LB9 341 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 S100A14Q9HCY8 104 aa12.56□□□□□ -0.4
COL7A1-204ENST00000462475 ZNF107Q9UII5 783 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-204ENST00000462475 DIMT1Q9UNQ2 313 aaKnown RBP12.56□□□□□ -0.4
COL7A1-204ENST00000462475 A0A1W2PPK0 400 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 LANCL1O43813 399 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 FSTP19883 344 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 GPR176Q14439 515 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 GNMTQ14749 295 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 MMDQ15546 238 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 ASPHD1Q5U4P2 390 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 C5orf24Q7Z6I8 188 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 OR11H1Q8NG94 326 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 OR14A2Q96R54 314 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 ASCL2Q99929 193 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 BANF2Q9H503 90 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 GNB4Q9HAV0 340 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 RAB9BQ9NP90 201 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 CKLFQ9UBR5 152 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 EXOSC1Q9Y3B2 195 aaKnown RBP12.55□□□□□ -0.4
COL7A1-204ENST00000462475 PEX16Q9Y5Y5 336 aa12.55□□□□□ -0.4
COL7A1-204ENST00000462475 TRBV5-7A0A0A0MS05 114 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 MYL12AP19105 171 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 AWAT2Q6E213 333 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 ZNF485Q8NCK3 441 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 ZNF555Q8NEP9 628 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 OR52L2PQ8NGH6 319 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 MRPS24Q96EL2 167 aaKnown RBP12.54□□□□□ -0.4
COL7A1-204ENST00000462475 RDH12Q96NR8 316 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 SELENOIQ9C0D9 397 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 TAF9BQ9HBM6 251 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
COL7A1-204ENST00000462475 ZNF256Q9Y2P7 627 aaPredicted RBP12.54□□□□□ -0.4
COL7A1-204ENST00000462475 WSB1Q9Y6I7 421 aa12.54□□□□□ -0.4
COL7A1-204ENST00000462475 DYNC2H1Q8NCM8 4307 aaKnown RBP12.53□□□□□ -0.4
COL7A1-204ENST00000462475 PNMA8CA0A1B0GUJ8 204 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 G3V318 75 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 ATP6V0E1O15342 81 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 SC5DO75845 299 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 OR5H8P0DN80 308 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 MGMTP16455 207 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 CNTFRP26992 372 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 PPIFP30405 207 aaKnown RBP12.53□□□□□ -0.4
COL7A1-204ENST00000462475 ACTBP60709 375 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 KIAA0141Q14154 515 aaPredicted RBP12.53□□□□□ -0.4
COL7A1-204ENST00000462475 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 SIGIRRQ6IA17 410 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 RITA1Q96K30 269 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 OR5B12Q96R08 314 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 ABHD14AQ9BUJ0 271 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 MRPL20Q9BYC9 149 aaKnown RBP12.53□□□□□ -0.4
COL7A1-204ENST00000462475 OR2S2Q9NQN1 319 aa12.53□□□□□ -0.4
COL7A1-204ENST00000462475 MBNL3Q9NUK0 354 aaKnown RBP12.53□□□□□ -0.4
COL7A1-204ENST00000462475 RYR2Q92736 4967 aa12.52□□□□□ -0.4
COL7A1-204ENST00000462475 UBE2QL1A1L167 161 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 I3L521 148 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 MAS1P04201 325 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 PPP1CCP36873 323 aaKnown RBP12.52□□□□□ -0.41
COL7A1-204ENST00000462475 GNB1P62873 340 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 MORN2Q502X0 79 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 LYPD6Q86Y78 171 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 ODF3L1Q8IXM7 274 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 C10orf67Q8IYJ2 551 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 ZNF491Q8N8L2 437 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.41
COL7A1-204ENST00000462475 TMEM80Q96HE8 168 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 Q96M66 194 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 NABP2Q9BQ15 211 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 PARP11Q9NR21 331 aa12.52□□□□□ -0.41
COL7A1-204ENST00000462475 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 FAM90A10PA6NDY2 464 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 FAM90A7PA6NKC0 464 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 FAM90A23PA8MXZ1 464 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 CA11O75493 328 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 CRTAPO75718 401 aaPredicted RBP12.51□□□□□ -0.41
COL7A1-204ENST00000462475 HLA-DRB1P01911 266 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 FUT3P21217 361 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 DOC2BQ14184 412 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 FAM46BQ96A09 425 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 UBE2E2Q96LR5 201 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 DERL3Q96Q80 235 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 OR51J1Q9H342 316 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 JPT1Q9UK76 154 aa12.51□□□□□ -0.41
COL7A1-204ENST00000462475 VSIG4Q9Y279 399 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms