RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 CD22P20273 847 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 HRH1P35367 487 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 CTRLP40313 264 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 PSG9Q00887 426 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ZP4Q12836 540 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ZIC1Q15915 447 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 PRSS53Q2L4Q9 553 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 TMEM249Q2WGJ8 235 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ANKRD55Q3KP44 614 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ELOA3BQ3SY89 546 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 DCST2Q5T1A1 773 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ZNF788Q6ZQV5 615 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 MDGA2Q7Z553 956 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ELOA3Q8NG57 546 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 OR2AE1Q8NHA4 323 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 SPATA3Q8NHX4 192 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 PTPMT1Q8WUK0 201 aaPredicted RBP5.05□□□□□ -1.6
CLK1-207ENST00000461981 TMEM255BQ8WV15 326 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 SLAMF6Q96DU3 332 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 OR2V2Q96R30 315 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 RTBDNQ9BSG5 229 aaPredicted RBP5.05□□□□□ -1.6
CLK1-207ENST00000461981 ABHD6Q9BV23 337 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 INPP5EQ9NRR6 644 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 ZNF462Q96JM2 2506 aa5.05□□□□□ -1.6
CLK1-207ENST00000461981 CACNA1CQ13936 2221 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 IGLC7A0M8Q6 106 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ALG1L2C9J202 215 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 CCL21O00585 134 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TAX1BP3O14907 124 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 XRCC2O43543 280 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 DUSP1P28562 367 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 PPOXP50336 477 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ATP5J2P56134 94 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 NANOS3P60323 173 aaKnown RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 ZNF266Q14584 549 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 IAH1Q2TAA2 248 aaPredicted RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 OR5AU1Q8NGC0 362 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 RASD2Q96D21 266 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 C2orf50Q96LR7 162 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 OR52D1Q9H346 318 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 PLEKHJ1Q9NW61 149 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 GNG13Q9P2W3 67 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 WASHC3Q9Y3C0 194 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 FBLL1A6NHQ2 334 aaKnown RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 HSPB2A8KAH6 182 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 K7N7A8 449 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 CDIPTO14735 213 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ST8SIA3O43173 380 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TRAF3IP2O43734 574 aaPredicted RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 EPPINO95925 133 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 HSPB1P04792 205 aaKnown RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 PFN1P07737 140 aaKnown RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 SP1P08047 785 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 SCGB1A1P11684 91 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 CD99P14209 185 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 GPR6P46095 362 aaPredicted RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 PRDX1Q06830 199 aaKnown RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 Q0VFX4 171 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 HSPB2Q16082 182 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 C2orf76Q3KRA6 126 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 PRR30Q53SZ7 412 aaPredicted RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 PHYHD1Q5SRE7 291 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 CCDC144NLQ6NUI1 221 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 SPSB3Q6PJ21 355 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 C1orf174Q8IYL3 243 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 POC1AQ8NBT0 407 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 NPEPL1Q8NDH3 523 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ZNF417Q8TAU3 575 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 SMDT1Q9H4I9 107 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TMEM242Q9NWH2 141 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 AHSPQ9NZD4 102 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 KIAA1456Q9P272 454 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 VDAC3Q9Y277 283 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 RHBDD3Q9Y3P4 386 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 IER3IP1Q9Y5U9 82 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TRAV8-6A0A0B4J262 113 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 A0A1B0GTH9 108 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 A0A1B0GW64 132 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 A0A1W2PPV9 198 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 FIGNL2A6NMB9 653 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 SHISA8B8ZZ34 492 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ZNF205O95201 554 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TIA1P31483 386 aaKnown RBP eCLIP5.04□□□□□ -1.66e-7■■□□□ 13.4
CLK1-207ENST00000461981 PTGER1P34995 402 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 PLP1P60201 277 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ARF3P61204 181 aaPredicted RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 ARF1P84077 181 aaKnown RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 BSXQ3C1V8 233 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 MPV17L2Q567V2 206 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 SGPP2Q8IWX5 399 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 SMIM20Q8N5G0 67 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 CHST4Q8NCG5 386 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 OR2G3Q8NGZ4 309 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ADAMTS15Q8TE58 950 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 RERGQ96A58 199 aaPredicted RBP5.04□□□□□ -1.6
CLK1-207ENST00000461981 Q96M85 177 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 RSG1Q9BU20 258 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms