RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SOHLH1Q5JUK2 328 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 MEX3BQ6ZN04 569 aaKnown RBP10.56□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF695Q8IW36 515 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 CISD2Q8N5K1 135 aaKnown RBP10.56□□□□□ -0.72
COL4A6-204ENST00000461897 C1orf162Q8NEQ5 155 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-204ENST00000461897 OR56B2PQ8NGI1 322 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 OR2G3Q8NGZ4 309 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 PLPPR1Q8TBJ4 325 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 TMEM171Q8WVE6 324 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 GNPNAT1Q96EK6 184 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-204ENST00000461897 CRIM1Q9NZV1 1036 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 PROCRQ9UNN8 238 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 UBE2J1Q9Y385 318 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-204ENST00000461897 A0A087WWC5 75 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 A0A1W2PPE3 182 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 RBFOX3A6NFN3 312 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 SLC34A2O95436 690 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 S100A9P06702 114 aaKnown RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 SLC25A6P12236 298 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 IDH3GP51553 393 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 UBE2NP61088 152 aaKnown RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 RPS23P62266 143 aaKnown RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 POLR2GP62487 172 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF818PQ6ZRF7 136 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 LINC00596Q86U02 117 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 CXorf67Q86X51 503 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 SUMF2Q8NBJ7 301 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 OR5D13Q8NGL4 314 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 ISOC2Q96AB3 205 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 FGF23Q9GZV9 251 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 RIMS4Q9H426 269 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 MAP1BP46821 2468 aaKnown RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 H0Y980 276 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 TIMP3P35625 211 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 HERPUD1Q15011 391 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 TBC1D28Q2M2D7 210 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 PRR30Q53SZ7 412 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 KRBOX4Q5JUW0 171 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 HEPN1Q6WQI6 88 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 MRPL21Q7Z2W9 205 aaKnown RBP10.55□□□□□ -0.72
COL4A6-204ENST00000461897 WDR31Q8NA23 367 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 MUCL1Q96DR8 90 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 OR51B6Q9H340 312 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 ATP23Q9Y6H3 246 aa10.55□□□□□ -0.72
COL4A6-204ENST00000461897 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 TRAV1-1A0A0B4J248 108 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 hCG_1809904A0A1W2PP81 198 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 A0A1W2PPE2 198 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 A0A1W2PR64 198 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 A0A1W2PRV1 198 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 AP4M1O00189 453 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 ADAM20O43506 726 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 HSPB1P04792 205 aaKnown RBP10.54□□□□□ -0.72
COL4A6-204ENST00000461897 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
COL4A6-204ENST00000461897 DAOP14920 347 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 BCL3P20749 454 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 FABP9Q0Z7S8 132 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 IL24Q13007 206 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 PDCD1Q15116 288 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 CEACAM21Q3KPI0 293 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF506Q5JVG8 444 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 GAPTQ8N292 157 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF565Q8N9K5 539 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 OR10G4Q8NGN3 311 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 CD300LFQ8TDQ1 290 aa10.54□□□□□ -0.72
COL4A6-204ENST00000461897 TLN1Q9Y490 2541 aaKnown RBP10.54□□□□□ -0.72
COL4A6-204ENST00000461897 IGKV1D-13A0A0B4J2D9 117 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 SSSCA1O60232 199 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 TMEM50AO95807 157 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 IFNA17P01571 189 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 IGKV3-15P01624 115 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 OR13C7P0DN81 318 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 IGKV1-13P0DP09 117 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 CEACAM8P31997 349 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-204ENST00000461897 VAMP2P63027 116 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 CCL20P78556 96 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 PRDX4Q13162 271 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 P2RY6Q15077 328 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 CXorf66Q5JRM2 361 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 RBMS3Q6XE24 437 aaKnown RBP10.53□□□□□ -0.72
COL4A6-204ENST00000461897 OR5C1Q8NGR4 320 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 NANPQ8TBE9 248 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 SNRNP40Q96DI7 357 aaKnown RBP10.53□□□□□ -0.72
COL4A6-204ENST00000461897 RBMXL1Q96E39 390 aaKnown RBP10.53□□□□□ -0.72
COL4A6-204ENST00000461897 RARRES2Q99969 163 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 C20orf24Q9BUV8 137 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 PLK3Q9H4B4 646 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 OPA3Q9H6K4 179 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 PRR14LQ5THK1 2151 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 HSD17B6O14756 317 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 SMPD2O60906 423 aa10.53□□□□□ -0.72
COL4A6-204ENST00000461897 AGFG2O95081 481 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms