RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 RTN4IP1Q8WWV3 396 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-206ENST00000461574 FLYWCH2Q96CP2 140 aaKnown RBP3.86□□□□□ -1.79
BRCA1-206ENST00000461574 OPALINQ96PE5 141 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 FEVQ99581 238 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 TBX5Q99593 518 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 ST6GALNAC5Q9BVH7 336 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 OSBPL10Q9BXB5 764 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 PRRG3Q9BZD7 231 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 SLC25A19Q9HC21 320 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 KIAA1456Q9P272 454 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 MRM2Q9UI43 246 aaKnown RBP3.86□□□□□ -1.79
BRCA1-206ENST00000461574 CEPT1Q9Y6K0 416 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 A3GALT2U3KPV4 340 aa3.86□□□□□ -1.79
BRCA1-206ENST00000461574 NUPR2A6NF83 97 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 H0Y980 276 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 IGLV1-51P01701 117 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 IGHV3-11P01762 117 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 UBCP0CG48 685 aaKnown RBP3.85□□□□□ -1.79
BRCA1-206ENST00000461574 TMEM225BP0DP42 221 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 CCL1P22362 96 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 SLC2A5P22732 501 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 PPIFP30405 207 aaKnown RBP3.85□□□□□ -1.79
BRCA1-206ENST00000461574 HTR1FP30939 366 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 F2RL1P55085 397 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 TPPP2P59282 170 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 PDZK1IP1Q13113 114 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 GALEQ14376 348 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 PLGLAQ15195 96 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 FAM98BQ52LJ0 330 aaKnown RBP3.85□□□□□ -1.79
BRCA1-206ENST00000461574 TMEM236Q5W0B7 351 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 FAHD1Q6P587 224 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 FAM220AQ7Z4H9 259 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 RDH10Q8IZV5 341 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 TCEANCQ8N8B7 351 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 OR10A7Q8NGE5 316 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 OR51T1Q8NGJ9 327 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 NEK7Q8TDX7 302 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 CASTOR1Q8WTX7 329 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 SPSB1Q96BD6 273 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 C10orf35Q96D05 121 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 SPACA5Q96QH8 159 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 NR1H4Q96RI1 486 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-206ENST00000461574 MBOAT4Q96T53 435 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF251Q9BRH9 671 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 TOLLIPQ9H0E2 274 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 CST11Q9H112 138 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 MAGIXQ9H6Y5 334 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 PLEKHA3Q9HB20 300 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 RHOFQ9HBH0 211 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 TVP23BQ9NYZ1 205 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF580Q9UK33 172 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 DHDHQ9UQ10 334 aa3.85□□□□□ -1.79
BRCA1-206ENST00000461574 FOXA2Q9Y261 457 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-206ENST00000461574 IGHV3-43A0A0B4J1X8 118 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 TRAV39A0A0B4J263 110 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 IGKV1-12A0A0C4DH73 117 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 CCDC182A6NF36 153 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ZNF736B4DX44 427 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 NPIPB11E5RHQ5 1161 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ARPC1BO15143 372 aaKnown RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 RGS11O94810 467 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 TPPPO94811 219 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 KDM4BO94953 1096 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 CNIH1O95406 144 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 CST1P01037 141 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 IGKV1D-12P01611 117 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 HLA-DRB1P01911 266 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 HSPB1P04792 205 aaKnown RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 IGHV3-43DP0DP04 118 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 DBTP11182 482 aaKnown RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 OSMP13725 252 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ATF1P18846 271 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ATP6V1B2P21281 511 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ZP3P21754 424 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 BLVRBP30043 206 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ATP6V1E1P36543 226 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ACTBP60709 375 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 RAP2BP61225 183 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 CDK5Q00535 292 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 GK3PQ14409 553 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 PYHIN1Q6K0P9 492 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 LIN54Q6MZP7 749 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 Q6P435 159 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 Q6ZSR3 168 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 PRR18Q8N4B5 295 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 RPP25LQ8N5L8 163 aaKnown RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 TMEM104Q8NE00 496 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 OR13C3Q8NGS6 347 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 OR13C9Q8NGT0 318 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 UBALD1Q8TB05 177 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 GATAD1Q8WUU5 269 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 RGP1Q92546 391 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ARL11Q969Q4 196 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 FGGYQ96C11 551 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 ADAT3Q96EY9 351 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 CPNE2Q96FN4 548 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-206ENST00000461574 LRGUKQ96M69 825 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 AIFM2Q9BRQ8 373 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 FAM192AQ9GZU8 254 aa3.84□□□□□ -1.79
BRCA1-206ENST00000461574 HIPK2Q9H2X6 1198 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms