RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 MT-ND4P03905 459 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 AMY1AP04745 511 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 AMY2AP04746 511 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 CLEC2LP0C7M8 214 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 MXD1Q05195 221 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 OR10K2Q6IF99 312 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 DRAM1Q8N682 238 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 OR4K15Q8NH41 348 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 AKR1E2Q96JD6 320 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 CITED2Q99967 270 aaPredicted RBP13.92□□□□□ -0.18
MRPL28-207ENST00000461550 PEX16Q9Y5Y5 336 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 PLXNB1O43157 2135 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 OOSP1A8MZH6 123 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 MCRIP1C9JLW8 97 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 SLC17A2O00624 439 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 SNRNP70P08621 437 aaKnown RBP13.91□□□□□ -0.18
MRPL28-207ENST00000461550 GZMHP20718 246 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 SDC2P34741 201 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 REG1BP48304 166 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 PSMD7P51665 324 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 RAB11BQ15907 218 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 CTF1Q16619 201 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 SIGIRRQ6IA17 410 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 NR2C2APQ86WQ0 139 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 OR10A7Q8NGE5 316 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 OR6M1Q8NGM8 313 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 MRPS24Q96EL2 167 aaKnown RBP13.91□□□□□ -0.18
MRPL28-207ENST00000461550 Q96M66 194 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 SPACA1Q9HBV2 294 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 TRAPPC2LQ9UL33 140 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 NOTCH3Q9UM47 2321 aa13.91□□□□□ -0.18
MRPL28-207ENST00000461550 UBE2QL1A1L167 161 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 MPIG6BO95866 241 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 VSIG8P0DPA2 414 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 TMBIM6P55061 237 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 HES1Q14469 280 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 HNF4GQ14541 408 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 PRR18Q8N4B5 295 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 ISOC1Q96CN7 298 aa13.9□□□□□ -0.18
MRPL28-207ENST00000461550 A0A1W2PRX2 142 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 ADARB2-AS1A8MUL3 147 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 C12orf77C9JDV5 145 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 UBBP0CG47 229 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 FAM106CPP0CH98 169 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 ARSBP15848 533 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 LOXL3P58215 753 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 VBP1P61758 197 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 NCS1P62166 190 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 PDLIM3Q53GG5 364 aaPredicted RBP13.89□□□□□ -0.19
MRPL28-207ENST00000461550 OR5AU1Q8NGC0 362 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 OR51D1Q8NGF3 324 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 RAB2BQ8WUD1 216 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 BORCS5Q969J3 196 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 GFOD1Q9NXC2 390 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 GHRLQ9UBU3 117 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 STEAP1Q9UHE8 339 aa13.89□□□□□ -0.19
MRPL28-207ENST00000461550 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 A0A0B4J203 849 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A18PA6NE21 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A16PA6NEW6 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A20PA6NIJ5 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A9PA6NNJ1 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A12PA8MX19 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A5PA8MXJ8 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 HSD17B6O14756 317 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 SLC31A2O15432 143 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 ORC5O43913 435 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 OPN1MWP04001 364 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A15PP0C7V4 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A13PP0C7W8 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A14PP0C7W9 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A24PP0C7X0 464 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 OPN1MW2P0DN77 364 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 OPN1MW3P0DN78 364 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 SLC2A2P11168 524 aaPredicted RBP13.88□□□□□ -0.19
MRPL28-207ENST00000461550 RCC1P18754 421 aaPredicted RBP13.88□□□□□ -0.19
MRPL28-207ENST00000461550 RAB7AP51149 207 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 C2orf76Q3KRA6 126 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 NKAPLQ5M9Q1 402 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 C10orf99Q6UWK7 81 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 C5orf24Q7Z6I8 188 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 TPRA1Q86W33 373 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 OR10V1Q8NGI7 309 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 OR1L1Q8NH94 360 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 FAM3DQ96BQ1 224 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 RBMXL1Q96E39 390 aaKnown RBP13.88□□□□□ -0.19
MRPL28-207ENST00000461550 CST11Q9H112 138 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 MOB4Q9Y3A3 225 aa13.88□□□□□ -0.19
MRPL28-207ENST00000461550 H3BMQ9 156 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 NOL3O60936 208 aaKnown RBP13.87□□□□□ -0.19
MRPL28-207ENST00000461550 BPNT1O95861 308 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 IGKV1D-33P01593 117 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 IGKV1-33P01594 117 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 TMEM11P17152 192 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 FUT3P21217 361 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms