RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GPR50Q13585 617 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 CT45A1Q5HYN5 189 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 C18orf65Q6ZTR6 163 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 FAM71E2Q8N5Q1 922 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 OR1L1Q8NH94 360 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 CT45A3Q8NHU0 189 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 S1PR3Q99500 378 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 RASL11BQ9BPW5 248 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 PLSCR3Q9NRY6 295 aa17.92■□□□□ 0.46
PTPN4-207ENST00000460162 LINC01548A6NM66 108 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 LANCL1O43813 399 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 PDCD6O75340 191 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 HOXD3P31249 432 aaPredicted RBP17.91■□□□□ 0.46
PTPN4-207ENST00000460162 ZNF134P52741 427 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 PNLIPRP3Q17RR3 467 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 OGFRL1Q5TC84 451 aaPredicted RBP17.91■□□□□ 0.46
PTPN4-207ENST00000460162 SIGIRRQ6IA17 410 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 NANOGP1Q8N7R0 232 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 TFAP2CQ92754 450 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 TAF9BQ9HBM6 251 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 FKBP14Q9NWM8 211 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 JPT1Q9UK76 154 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 ERGIC3Q9Y282 383 aa17.91■□□□□ 0.46
PTPN4-207ENST00000460162 WI2-2373I1.2A0A1W2PRP0 233 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 ZNF736B4DX44 427 aaPredicted RBP17.9■□□□□ 0.46
PTPN4-207ENST00000460162 CASQ2O14958 399 aaPredicted RBP17.9■□□□□ 0.46
PTPN4-207ENST00000460162 UBBP0CG47 229 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 FOXE3Q13461 319 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 CXorf66Q5JRM2 361 aaPredicted RBP17.9■□□□□ 0.46
PTPN4-207ENST00000460162 RNF152Q8N8N0 203 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 BPIFB6Q8NFQ5 453 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 OR2S2Q9NQN1 319 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 KCNIP1Q9NZI2 227 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 ZNF580Q9UK33 172 aa17.9■□□□□ 0.46
PTPN4-207ENST00000460162 H0YHG0 523 aa17.89■□□□□ 0.45
PTPN4-207ENST00000460162 SOX6P35712 828 aa17.89■□□□□ 0.45
PTPN4-207ENST00000460162 VHLP40337 213 aa17.89■□□□□ 0.45
PTPN4-207ENST00000460162 LSAMPQ13449 338 aa17.89■□□□□ 0.45
PTPN4-207ENST00000460162 MRPL30Q8TCC3 161 aaKnown RBP17.89■□□□□ 0.45
PTPN4-207ENST00000460162 FAM46BQ96A09 425 aa17.89■□□□□ 0.45
PTPN4-207ENST00000460162 ABHD14AQ9BUJ0 271 aa17.89■□□□□ 0.45
PTPN4-207ENST00000460162 COL7A1Q02388 2944 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 UBE2QL1A1L167 161 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 ELANEP08246 267 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 GP2P55259 537 aaKnown RBP17.88■□□□□ 0.45
PTPN4-207ENST00000460162 CFHR3Q02985 330 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 MORN2Q502X0 79 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 C6orf141Q5SZD1 244 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 MS4A15Q8N5U1 240 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 OR8U1Q8NH10 309 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 HSPB9Q9BQS6 159 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 MND1Q9BWT6 205 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 VCXQ9H320 206 aa17.88■□□□□ 0.45
PTPN4-207ENST00000460162 ZMAT5Q9UDW3 170 aaKnown RBP17.88■□□□□ 0.45
PTPN4-207ENST00000460162 RPLP1P05386 114 aaKnown RBP17.87■□□□□ 0.45
PTPN4-207ENST00000460162 VDAC1P21796 283 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 HTD2P86397 168 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 DCTN2Q13561 401 aaKnown RBP17.87■□□□□ 0.45
PTPN4-207ENST00000460162 GNMTQ14749 295 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 NKAPLQ5M9Q1 402 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 RNLSQ5VYX0 342 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 PHYHIPQ92561 330 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 RAX2Q96IS3 184 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 DCLRE1BQ9H816 532 aa17.87■□□□□ 0.45
PTPN4-207ENST00000460162 CCL24O00175 119 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 IGHG4P01861 327 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 IGF1P05019 195 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 OR5H8P0DN80 308 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 CDX1P47902 265 aaPredicted RBP17.86■□□□□ 0.45
PTPN4-207ENST00000460162 F2RL1P55085 397 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 GABPB1Q06547 395 aaPredicted RBP17.86■□□□□ 0.45
PTPN4-207ENST00000460162 ACSM3Q53FZ2 586 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 LY6G6FQ5SQ64 297 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 CYYR1Q96J86 154 aa17.86■□□□□ 0.45
PTPN4-207ENST00000460162 ZNF107Q9UII5 783 aaPredicted RBP17.86■□□□□ 0.45
PTPN4-207ENST00000460162 YPEL1O60688 119 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 RGS11O94810 467 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 CDK1P06493 297 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 CHATP28329 748 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 PPP1CCP36873 323 aaKnown RBP17.85■□□□□ 0.45
PTPN4-207ENST00000460162 INSL4Q14641 139 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 MMDQ15546 238 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 DEFB121Q5J5C9 76 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 RBM48Q5RL73 367 aaKnown RBP17.85■□□□□ 0.45
PTPN4-207ENST00000460162 GLT8D1Q68CQ7 371 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 UNQ9370/PRO34162Q6UXP9 181 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 OR52L2PQ8NGH6 319 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 GALMQ96C23 342 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 DUX3Q96PT4 197 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 NEDD4LQ96PU5 975 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 YPEL2Q96QA6 119 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 TMEM59Q9BXS4 323 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 LRRC42Q9Y546 428 aa17.85■□□□□ 0.45
PTPN4-207ENST00000460162 VSIG8P0DPA2 414 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 RPS27AP62979 156 aaKnown RBP17.84■□□□□ 0.45
PTPN4-207ENST00000460162 KIR2DS1Q14954 304 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 HMGN3Q15651 99 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 VAX1Q5SQQ9 334 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 C1orf100Q5SVJ3 147 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 FAM27D1Q5T7N8 215 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms