RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TRBV23-1A0A0A0MS06 115 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 C5orf49A4QMS7 147 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 FAM90A26D6RGX4 464 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 SPRY1O43609 319 aaPredicted RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 PPYP01298 95 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 COL8A1P27658 744 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 TWIST1Q15672 202 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 ACSM6Q6P461 480 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 ABCA7Q8IZY2 2146 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 TMEM45BQ96B21 275 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 IP6K3Q96PC2 410 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 TSPAN32Q96QS1 320 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 GNB4Q9HAV0 340 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 SLC52A3Q9NQ40 469 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 ST6GALNAC2Q9UJ37 374 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 CFDP00746 253 aaPredicted RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 NGFP01138 241 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 MYF5P13349 255 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 TDGF1P13385 188 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 LSM6P62312 80 aaKnown RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 FMODQ06828 376 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 FNDC7Q5VTL7 733 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 WDR25Q64LD2 544 aaPredicted RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 RNF133Q8WVZ7 376 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 MED29Q9NX70 200 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 RECKO95980 971 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 CSRP1P21291 193 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 RPL30P62888 115 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 ZNF506Q5JVG8 444 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 NFAM1Q8NET5 270 aaPredicted RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 HSF4Q9ULV5 492 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 MRPS2Q9Y399 296 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 KCNE3Q9Y6H6 103 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 CYR61O00622 381 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 FAM157CP0CG43 387 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 FOXC1Q12948 553 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 PSG5Q15238 335 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 RPS19BP1Q86WX3 136 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 OR5AS1Q8N127 324 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 GVQW1Q8N7I0 195 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 FAM169BQ8N8A8 192 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 MOGAT1Q96PD6 335 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 PARLQ9H300 379 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 LANCL2Q9NS86 450 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 THYN1Q9P016 225 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 ICAM5Q9UMF0 924 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 CENPFP49454 3210 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 DNAH12Q6ZR08 3092 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 OR3A4PP47883 348 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 GZMMP51124 257 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 ZCCHC14Q8WYQ9 949 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 FBXO17Q96EF6 278 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 FRRS1LQ9P0K9 344 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 B4E171 279 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 HES3Q5TGS1 186 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 PEAR1Q5VY43 1037 aaPredicted RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 SHISA6Q6ZSJ9 500 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 BHLHE23Q8NDY6 225 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 HSD17B10Q99714 261 aaKnown RBP8.54□□□□□ -1.04
UFD1-205ENST00000459854 RARRES2Q99969 163 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 PCGF1Q9BSM1 259 aa8.54□□□□□ -1.04
UFD1-205ENST00000459854 ZNF785A8K8V0 405 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 F12P00748 615 aaPredicted RBP8.53□□□□□ -1.04
UFD1-205ENST00000459854 HKR1P10072 659 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 CEACAM1P13688 526 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 AGAP20933 346 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 OPRK1P41145 380 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 GFERP55789 205 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 RPS11P62280 158 aaKnown RBP eCLIP8.53□□□□□ -1.04
UFD1-205ENST00000459854 TCF15Q12870 199 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 ACER2Q5QJU3 275 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 TEPPQ6URK8 271 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 NPEPL1Q8NDH3 523 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 RGP1Q92546 391 aaPredicted RBP8.53□□□□□ -1.04
UFD1-205ENST00000459854 GRAMD2BQ96HH9 432 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 MRPL13Q9BYD1 178 aaKnown RBP8.53□□□□□ -1.04
UFD1-205ENST00000459854 C20orf141Q9NUB4 165 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 GPR132Q9UNW8 380 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 RPS27P42677 84 aaKnown RBP8.53□□□□□ -1.04
UFD1-205ENST00000459854 DSCR4P56555 118 aaPredicted RBP8.53□□□□□ -1.04
UFD1-205ENST00000459854 TMEM50BP56557 158 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 NEUROG1Q92886 237 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 CACNA1HO95180 2353 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 SPAARA0A1B0GVQ0 90 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 ZNF716A6NP11 495 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 KBTBD11O94819 623 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 IL11RAQ14626 422 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 DCAF12L2Q5VW00 463 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 FOXB1Q99853 325 aa8.53□□□□□ -1.04
UFD1-205ENST00000459854 PSMG3Q9BT73 122 aaPredicted RBP8.53□□□□□ -1.04
UFD1-205ENST00000459854 MRPL37Q9BZE1 423 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms