RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 IGKV1-27A0A075B6S5 117 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 SFTA3P0C7M3 94 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 FKBP2P26885 142 aaKnown RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 CXCL12P48061 93 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 PIGPP57054 158 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 SURF2Q15527 256 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 GUK1Q16774 197 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF774Q6NX45 483 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 STHQ8IWL8 128 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 C2CD4CQ8TF44 421 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF251Q9BRH9 671 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 J3QKU1 62 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 TAAR5O14804 337 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 IFNA21P01568 189 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 LIFP15018 202 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 OTX1P32242 354 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 HIST1H3AP68431 136 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 HGFACQ04756 655 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 HIST2H3PS2Q5TEC6 136 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 EIF5AL1Q6IS14 154 aaKnown RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 HIST2H3AQ71DI3 136 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 MYPOPQ86VE0 399 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 REEP6Q96HR9 211 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 FAM210BQ96KR6 192 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 CMSS1Q9BQ75 279 aaKnown RBP10.1□□□□□ -0.79
SYNE2-207ENST00000458046 DUSP23Q9BVJ7 150 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 SRXN1Q9BYN0 137 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 CRYM-AS1A6NIL9 109 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 C17orf100A8MU93 164 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 DEDDO75618 318 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 CTSDP07339 412 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-207ENST00000458046 UMODP07911 640 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 AKR1C3P42330 323 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF84P51523 738 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 DSCR4P56555 118 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-207ENST00000458046 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
SYNE2-207ENST00000458046 PIGYQ3MUY2 71 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 PHLDA2Q53GA4 152 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 TCEAL6Q6IPX3 200 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 OPN5Q6U736 354 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 Q6ZRG5 221 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 SULT4A1Q9BR01 284 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF430Q9H8G1 570 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-207ENST00000458046 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 GCN1Q92616 2671 aaKnown RBP10.09□□□□□ -0.79
SYNE2-207ENST00000458046 IGHV1-45A0A0A0MS14 117 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 GEMIN2O14893 280 aaKnown RBP10.09□□□□□ -0.79
SYNE2-207ENST00000458046 SGCEO43556 437 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 CRYBA1P05813 215 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 OR8U9P0C7N5 309 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 LINC00614P0C842 121 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 MEOX2P50222 304 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 SULT1A2P50226 295 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 BTNL8Q6UX41 500 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 OR8U1Q8NH10 309 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 RXFP4Q8TDU9 374 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 AMDHD2Q9Y303 409 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 MMP24Q9Y5R2 645 aa10.09□□□□□ -0.79
SYNE2-207ENST00000458046 XRCC2O43543 280 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 IFNA5P01569 189 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 GAPDHP04406 335 aaKnown RBP10.08□□□□□ -0.8
SYNE2-207ENST00000458046 FCGR3AP08637 254 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 OR5AC1P0C628 307 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 RAB13P51153 203 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 ZNF133P52736 654 aaPredicted RBP10.08□□□□□ -0.8
SYNE2-207ENST00000458046 FAM27BQ5VT28 67 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 TMEM268Q5VZI3 342 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 PLXDC2Q6UX71 529 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 P4HA3Q7Z4N8 544 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 LYZL2Q7Z4W2 148 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 M0QZ24 198 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 JTBO76095 146 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 MBPP02686 304 aaPredicted RBP10.08□□□□□ -0.8
SYNE2-207ENST00000458046 ZNF728P0DKX0 622 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 CCL4P13236 92 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 SSR4P51571 173 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 HLA-BQ31612 363 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 ABCA11PQ4W5N1 156 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 NSUN5P2Q63ZY6 315 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 DHRS11Q6UWP2 260 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 FOXL2NBQ6ZUU3 175 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 OR2D3Q8NGH3 330 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 MRGPRDQ8TDS7 321 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
SYNE2-207ENST00000458046 BORCS8Q96FH0 119 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 IMMP1LQ96LU5 166 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 KCNIP3Q9Y2W7 256 aa10.08□□□□□ -0.8
SYNE2-207ENST00000458046 ZNHIT1O43257 154 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 CA11O75493 328 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 SPP1P10451 314 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 COX6A1P12074 109 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 RFC3P40938 356 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 NOVA1P51513 510 aaKnown RBP10.07□□□□□ -0.8
SYNE2-207ENST00000458046 UBE2KP61086 200 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 LCN2P80188 198 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 PEA15Q15121 130 aa10.07□□□□□ -0.8
SYNE2-207ENST00000458046 COX19Q49B96 90 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms