RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 JPT1Q9UK76 154 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 FBN1P35555 2871 aaKnown RBP11.43□□□□□ -0.58
SMPD4-215ENST00000457039 TRDCB7Z8K6 153 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 TOR1AO14656 332 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 HOXA3O43365 443 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-215ENST00000457039 SSX5O60225 188 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 DTYMKP23919 212 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 PAX6P26367 422 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 HTR1DP28221 377 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 IER3P46695 156 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 GNG10P50151 68 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 PRRX1P54821 245 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 MRPS15P82914 257 aaKnown RBP11.43□□□□□ -0.58
SMPD4-215ENST00000457039 BAMBIQ13145 260 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 ARFRP1Q13795 201 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 GNMTQ14749 295 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 SLC9A3R2Q15599 337 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 MORN2Q502X0 79 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 LY6G6FQ5SQ64 297 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 TMEM86BQ8N661 226 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 NUDCD2Q8WVJ2 157 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 GALMQ96C23 342 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 AUNIPQ9H7T9 357 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 DPM3Q9P2X0 92 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 GNG12Q9UBI6 72 aa11.43□□□□□ -0.58
SMPD4-215ENST00000457039 RSL24D1Q9UHA3 163 aaKnown RBP11.43□□□□□ -0.58
SMPD4-215ENST00000457039 ZNF230Q9UIE0 474 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-215ENST00000457039 IGKV1D-8A0A087WSZ0 117 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 IGKV1-6A0A0C4DH72 117 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 A0A1W2PPE3 182 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 VGLL3A8MV65 326 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 SLC31A2O15432 143 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 YPEL1O60688 119 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 HPGDSO60760 199 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 IGHV4-59P01825 116 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 SCTP09683 121 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 ELK1P19419 428 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 SOX6P35712 828 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 ZNF134P52741 427 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 UBA52P62987 128 aaKnown RBP11.42□□□□□ -0.58
SMPD4-215ENST00000457039 PITPNAQ00169 270 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 HERPUD1Q15011 391 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 AANATQ16613 207 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 KRTAP21-3Q3LHN1 58 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 STEAP3Q658P3 488 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 MZT2AQ6P582 158 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 IZUMO1Q8IYV9 350 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 DTX3Q8N9I9 347 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 OR10V1Q8NGI7 309 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 SSMEM1Q8WWF3 244 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 MAFIPQ8WZ33 124 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 CREB3L1Q96BA8 519 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 YPEL2Q96QA6 119 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 SLIRPQ9GZT3 109 aaKnown RBP11.42□□□□□ -0.58
SMPD4-215ENST00000457039 POMT1Q9Y6A1 747 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 ATRQ13535 2644 aa11.42□□□□□ -0.58
SMPD4-215ENST00000457039 SMIM31A0A1B0GVY4 71 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 CCDC160A6NGH7 325 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 FABP7O15540 132 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 RNASE1P07998 156 aaKnown RBP11.41□□□□□ -0.58
SMPD4-215ENST00000457039 GSTT2P0CG29 244 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 GSTT2BP0CG30 244 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 PTHLHP12272 177 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 PPP1CCP36873 323 aaKnown RBP11.41□□□□□ -0.58
SMPD4-215ENST00000457039 TALDO1P37837 337 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 KIR2DS4P43632 304 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 TAS2R20P59543 309 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 GNG2P59768 71 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 KIR2DS1Q14954 304 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 SSX2Q16385 188 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 CT45A1Q5HYN5 189 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 TMEM69Q5SWH9 247 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
SMPD4-215ENST00000457039 OR4A4PQ8NGN8 299 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 CT45A3Q8NHU0 189 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 PIFOQ8TCI5 191 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 ZFAND2BQ8WV99 257 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 IL1F10Q8WWZ1 152 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 DUX5Q96PT3 197 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 OCSTAMPQ9BR26 566 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 CABLES2Q9BTV7 478 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 NXF2Q9GZY0 626 aaKnown RBP11.41□□□□□ -0.58
SMPD4-215ENST00000457039 MIXL1Q9H2W2 232 aa11.41□□□□□ -0.58
SMPD4-215ENST00000457039 CTDSP2O14595 271 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 DIRAS3O95661 229 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 HLA-DQB1P01920 261 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 MNDAP41218 407 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 ST6GALNAC6Q969X2 333 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 SSX3Q99909 188 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 TOLLIPQ9H0E2 274 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 DPAGT1Q9H3H5 408 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 OR1A1Q9P1Q5 309 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 AMMECR1Q9Y4X0 333 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-215ENST00000457039 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.58
SMPD4-215ENST00000457039 DPPA5A6NC42 116 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms