RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ARG1P05089 322 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 ZBTB25P24278 435 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 PTBP1P26599 531 aaKnown RBP eCLIP11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 TNFSF8P32971 234 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 KLRD1Q13241 179 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 PYHIN1Q6K0P9 492 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 LINC00299Q6ZSB3 139 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 PRR18Q8N4B5 295 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 GPX8Q8TED1 209 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 YPEL2Q96QA6 119 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 CABLES2Q9BTV7 478 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 ST6GALNAC5Q9BVH7 336 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 TOLLIPQ9H0E2 274 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 MMP28Q9H239 520 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 GHITMQ9H3K2 345 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 PRDM13Q9H4Q3 707 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 ELF5Q9UKW6 265 aaPredicted RBP11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 AMMECR1Q9Y4X0 333 aaPredicted RBP11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 A0A0A6YYJ9 748 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 J3QR06 171 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 CTDSPLO15194 276 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 SCTP09683 121 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 HTR1DP28221 377 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 SAA4P35542 130 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 AANATQ16613 207 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 LTC4SQ16873 150 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 HLA-DRB5Q30154 266 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 PDZD9Q8IXQ8 264 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 IL1F10Q8WWZ1 152 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 MALSU1Q96EH3 234 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 SOSTQ9BQB4 213 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 FAM96BQ9Y3D0 163 aa11.63□□□□□ -0.55
HMGXB4-204ENST00000455359 TRBV6-7A0A0A0MS04 114 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 MEIOCA2RUB1 952 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 LEUTXA8MZ59 168 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 OOSP1A8MZH6 123 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 FBP1P09467 338 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 GSTT2BP0CG30 244 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 NAT1P18440 290 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 CEACAM3P40198 252 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 ETV6P41212 452 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 DLX1P56177 255 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 PRB3Q04118 309 aaPredicted RBP11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 SSBP1Q04837 148 aaKnown RBP11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 MORN2Q502X0 79 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 RBMS3Q6XE24 437 aaKnown RBP11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 SNX29P2Q8IUI4 249 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 DTX3Q8N9I9 347 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 OR52L2PQ8NGH6 319 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 OR4P4Q8NGL7 312 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 OR6Q1Q8NGQ2 317 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 UBALD1Q8TB05 177 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 EDARADDQ8WWZ3 215 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 IFT46Q9NQC8 304 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 DPM3Q9P2X0 92 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 NF1P21359 2839 aa11.62□□□□□ -0.55
HMGXB4-204ENST00000455359 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 HSPA12AO43301 675 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 IFNA2P01563 188 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 IL3RAP26951 378 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 RCVRNP35243 200 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 RAB7AP51149 207 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 ACTBP60709 375 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 ACTG1P63261 375 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 MADCAM1Q13477 382 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 SPANXN2Q5MJ10 180 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 CCDC144NLQ6NUI1 221 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 CCDC190Q86UF4 302 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 ZNF439Q8NDP4 499 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 OR2AK2Q8NG84 335 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 OR10X1Q8NGY0 326 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 ZNF418Q8TF45 676 aaPredicted RBP11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 FCAMRQ8WWV6 532 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 JMJD8Q96S16 334 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 MEGF9Q9H1U4 602 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 SLC23A1Q9UHI7 598 aa11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 ZNF107Q9UII5 783 aaPredicted RBP11.61□□□□□ -0.55
HMGXB4-204ENST00000455359 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 A0A0U1RQK1 487 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 GABARAPH6UMI1 98 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 PTHLHP12272 177 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 PPP1CCP36873 323 aaKnown RBP11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 CEACAM6P40199 344 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 ARHGDIBP52566 201 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 ZNF137PP52743 207 aa11.6□□□□□ -0.55
HMGXB4-204ENST00000455359 TAS2R46P59540 309 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms