RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TMEM106BQ9NUM4 274 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 RDH8Q9NYR8 311 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 KIF25Q9UIL4 384 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 TNFSF18Q9UNG2 199 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 HSPB11Q9Y547 144 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 PLCE1Q9P212 2302 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 CHD8Q9HCK8 2581 aa5.71□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A1B0GU03 582 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A1B0GW55 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 WNT9BO14905 357 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 PGLYRP1O75594 196 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 MPC2O95563 127 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 HBZP02008 142 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4L2P0CJ85 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4L3P0CJ86 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4L4P0CJ87 422 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4L5P0CJ88 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4L6P0CJ89 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4L7P0CJ90 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 RCC1P18754 421 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 LY6DQ14210 128 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 HFEQ30201 348 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 TMEM155Q4W5P6 130 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 BRICD5Q6PL45 260 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 ZNF546Q86UE3 836 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 SLC51BQ86UW2 128 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 FAM71E2Q8N5Q1 922 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 LRRC20Q8TCA0 184 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 CASTOR1Q8WTX7 329 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 PPP1R1CQ8WVI7 109 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 ITLN2Q8WWU7 325 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 RBPMSQ93062 196 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 TOMM40LQ969M1 308 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 PLA2G2EQ9NZK7 142 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 DUX4Q9UBX2 424 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 FREM2Q5SZK8 3169 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 IGF2RP11717 2491 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 IGHV1-69-2A0A0G2JMI3 117 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 KBTBD11-OT1A0A1B0GTJ5 212 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 FAM221AA4D161 298 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 OR5AC1P0C628 307 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 EGR1P18146 543 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 CEACAM6P40199 344 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 FXYD4P59646 89 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 UBA52P62987 128 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 ATXN7L3Q14CW9 347 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 PDCD1Q15116 288 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 LGALSLQ3ZCW2 172 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 LRRC10Q5BKY1 277 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 TBC1D26Q86UD7 250 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 ZNF695Q8IW36 515 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 TNFRSF14Q92956 283 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 GAFA1Q96PS6 74 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 AQP10Q96PS8 301 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 CHIAQ9BZP6 476 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 CLN8Q9UBY8 286 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 CADP27708 2225 aa5.7□□□□□ -1.5
ECHDC1-210ENST00000454859 PRR14LQ5THK1 2151 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ACACBO00763 2458 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 MAP1BP46821 2468 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 E5RGE8 158 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 NDUFB3O43676 98 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 RP2O75695 350 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 SERPINE2P07093 398 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 FGF2P09038 288 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 PVALBP20472 110 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 AESQ08117 197 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 BAMBIQ13145 260 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 SLC9A3R2Q15599 337 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 DCAF12L2Q5VW00 463 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 GGNBP1Q5YKI7 109 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 THOC7Q6I9Y2 204 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ZNF818PQ6ZRF7 136 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 OR11H4Q8NGC9 324 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ZNF596Q8TC21 504 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 SECTM1Q8WVN6 248 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ARL11Q969Q4 196 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 TIMD4Q96H15 378 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 CNTNAP3BQ96NU0 1288 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 SPOCK3Q9BQ16 436 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 CNTNAP3Q9BZ76 1288 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 MFFQ9GZY8 342 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 NSG2Q9Y328 171 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 MAB21L2Q9Y586 359 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 RAI1Q7Z5J4 1906 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 DSCAMO60469 2012 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 RP1L1Q8IWN7 2480 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 COL6A6A6NMZ7 2263 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ZFHX4Q86UP3 3567 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 TRAV14DV4A0A0A6YYC5 116 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 RNF222A6NCQ9 220 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 NKX2-6A6NCS4 301 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 HSPB6O14558 160 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ST8SIA3O43173 380 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 PHF1O43189 567 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ZG16O60844 167 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 DAOP14920 347 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 TAS2R30P59541 319 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 IFITM2Q01629 132 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 EIF4EBP1Q13541 118 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms