RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SDSLQ96GA7 329 aa10.2□□□□□ -0.78
SMPD4-213ENST00000454468 FAM117AQ9C073 453 aa10.2□□□□□ -0.78
SMPD4-213ENST00000454468 OR2D2Q9H210 308 aa10.2□□□□□ -0.78
SMPD4-213ENST00000454468 WNK2Q9Y3S1 2297 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 A0A1W2PPE3 182 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 OR5B21A6NL26 309 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 GATCO43716 136 aaKnown RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 WT1P19544 449 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 LINC00205P59089 165 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 OR2B8PP59922 312 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 RAB5BP61020 215 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 PSG7Q13046 419 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 ZNF674Q2M3X9 581 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 TMEM42Q69YG0 159 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 KLF14Q8TD94 323 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 TMEM222Q9H0R3 208 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 WFDC1Q9HC57 220 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 ZFP57Q9NU63 452 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 RCC2Q9P258 522 aaKnown RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 PROCRQ9UNN8 238 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 UMAD1C9J7I0 102 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 J3QT63 122 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 ATXN7O15265 892 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 HEXAP06865 529 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 SPP1P10451 314 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 FAM201AQ5SY85 155 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 BCL2L2Q92843 193 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 ABHD14BQ96IU4 210 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 TAAR3PQ9P1P4 343 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 GNG13Q9P2W3 67 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 ATP23Q9Y6H3 246 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 SPTBN4Q9H254 2564 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 TRAV24A0A0B4J272 114 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 CEBPZOSA8MTT3 80 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 PGLYRP1O75594 196 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-213ENST00000454468 FBP1P09467 338 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 SOHLH1Q5JUK2 328 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 C9orf106Q8NAJ2 232 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 PLPPR1Q8TBJ4 325 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 NTNG2Q96CW9 530 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 LINC00470Q9BZP3 86 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 PLEKHF2Q9H8W4 249 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 NDRG3Q9UGV2 375 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 PSG11Q9UQ72 335 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
SMPD4-213ENST00000454468 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 OR5H1A6NKK0 313 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ZNF724A8MTY0 619 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 IFNA17P01571 189 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ZNF14P17017 642 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ATP6V0CP27449 155 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 SRPXP78539 464 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 HERPUD1Q15011 391 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 TESK1Q15569 626 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ADAMTS17Q8TE56 1095 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 MSI2Q96DH6 328 aaKnown RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 GMPPAQ96IJ6 420 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 NRIP2Q9BQI9 281 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 COA4Q9NYJ1 87 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 AUP1Q9Y679 476 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ARFGEF3Q5TH69 2177 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 HAND1O96004 215 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 CTXN2P0C2S0 81 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ZNF266Q14584 549 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 MPV17LQ2QL34 196 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 AVPI1Q5T686 147 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 SELENOHQ8IZQ5 122 aaKnown RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 TMEM252Q8N6L7 170 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 MUCL1Q96DR8 90 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 PBDC1Q9BVG4 233 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 CFAP47Q6ZTR5 3102 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 IGSF23A1L1A6 192 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 FOXI3A8MTJ6 420 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 DNASE2O00115 360 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 RRP8O43159 456 aaKnown RBP10.18□□□□□ -0.78
SMPD4-213ENST00000454468 VDAC1P21796 283 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 RAB2AP61019 212 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 HLA-DRB3P79483 266 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 CLEC12BQ2HXU8 276 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 ZNF718Q3SXZ3 478 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 LRRC29Q8WV35 223 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 RARRES2Q99969 163 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
SMPD4-213ENST00000454468 C1orf196B1AJZ1 125 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 F2RP25116 425 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 G6PCP35575 357 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 LEAP2Q969E1 77 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 GALMQ96C23 342 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 PARD6AQ9NPB6 346 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 IGKV1-6A0A0C4DH72 117 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 ACAA1P09110 424 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-213ENST00000454468 SSTR5P35346 364 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 Q6ZPA2 131 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 MDS2Q8NDY4 140 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 DMBX1Q8NFW5 382 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 SNIP1Q8TAD8 396 aaKnown RBP10.17□□□□□ -0.78
SMPD4-213ENST00000454468 MEGF10Q96KG7 1140 aa10.17□□□□□ -0.78
SMPD4-213ENST00000454468 PURGQ9UJV8 347 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms