RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MRAPQ8TCY5 172 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 TMED9Q9BVK6 235 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 TAF9BQ9HBM6 251 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 OR2S2Q9NQN1 319 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 LINC00527Q9UJ94 153 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 SLC31A2O15432 143 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 PDCD6O75340 191 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 SC5DO75845 299 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 MPIG6BO95866 241 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 MOSP00540 346 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 CD1BP29016 333 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 CT45A1Q5HYN5 189 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 RBM48Q5RL73 367 aaKnown RBP10.19□□□□□ -0.78
CHD3-206ENST00000452447 C6orf141Q5SZD1 244 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 FAM27D1Q5T7N8 215 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 STEAP3Q658P3 488 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 SIGIRRQ6IA17 410 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 Q6ZPA2 131 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 OR51D1Q8NGF3 324 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 CT45A3Q8NHU0 189 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 RCC1LQ96I51 464 aaKnown RBP10.19□□□□□ -0.78
CHD3-206ENST00000452447 CNBD2Q96M20 576 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 NEDD4LQ96PU5 975 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 ZFP57Q9NU63 452 aa10.19□□□□□ -0.78
CHD3-206ENST00000452447 LIN7CQ9NUP9 197 aaKnown RBP10.19□□□□□ -0.78
CHD3-206ENST00000452447 AP4M1O00189 453 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 DUS4LO95620 317 aaKnown RBP10.18□□□□□ -0.78
CHD3-206ENST00000452447 SRMP19623 302 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 ZNF134P52741 427 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 ZNF137PP52743 207 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 HSD17B12Q53GQ0 312 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 UNQ9370/PRO34162Q6UXP9 181 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 CEACAM19Q7Z692 300 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 ZNF554Q86TJ5 538 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 STPG2Q8N412 459 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 COMMD1Q8N668 190 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 Q8N6K4 173 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 ZNF439Q8NDP4 499 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 PHYHIPQ92561 330 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 GON7Q9BXV9 100 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 ABCG5Q9H222 651 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 MBNL3Q9NUK0 354 aaKnown RBP10.18□□□□□ -0.78
CHD3-206ENST00000452447 AURKAIP1Q9NWT8 199 aaPredicted RBP10.18□□□□□ -0.78
CHD3-206ENST00000452447 TPRKBQ9Y3C4 175 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 NUDT19A8MXV4 375 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 GPR12P47775 334 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 RPL23AP62750 156 aaKnown RBP10.18□□□□□ -0.78
CHD3-206ENST00000452447 MORN2Q502X0 79 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 OR10K2Q6IF99 312 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 OR2W3Q7Z3T1 314 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 KCNG3Q8TAE7 436 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 MRPL30Q8TCC3 161 aaKnown RBP10.18□□□□□ -0.78
CHD3-206ENST00000452447 GALMQ96C23 342 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 TMEM59Q9BXS4 323 aa10.18□□□□□ -0.78
CHD3-206ENST00000452447 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 ZNF736B4DX44 427 aaPredicted RBP10.17□□□□□ -0.78
CHD3-206ENST00000452447 HSMCR30P0CW71 290 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 HTR2CP28335 458 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 SLC6A1P30531 599 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 GP2P55259 537 aaKnown RBP10.17□□□□□ -0.78
CHD3-206ENST00000452447 C1orf100Q5SVJ3 147 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 LIPKQ5VXJ0 399 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 TEX38Q6PEX7 206 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 LRRTM1Q86UE6 522 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 Q8N9W7 124 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 OR52L2PQ8NGH6 319 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 UFD1Q92890 307 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 S1PR3Q99500 378 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 ABHD14AQ9BUJ0 271 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 YTHDF1Q9BYJ9 559 aaKnown RBP10.17□□□□□ -0.78
CHD3-206ENST00000452447 JPT1Q9UK76 154 aa10.17□□□□□ -0.78
CHD3-206ENST00000452447 LSM2Q9Y333 95 aaKnown RBP10.17□□□□□ -0.78
CHD3-206ENST00000452447 LANCL1O43813 399 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 RGS11O94810 467 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 CHATP28329 748 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 SOX6P35712 828 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 RPS27AP62979 156 aaKnown RBP10.16□□□□□ -0.78
CHD3-206ENST00000452447 HTD2P86397 168 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 PNLIPRP3Q17RR3 467 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 C8orf86Q6ZUL3 223 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 MRPL41Q8IXM3 137 aaKnown RBP10.16□□□□□ -0.78
CHD3-206ENST00000452447 LINC00482Q8N8I6 264 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 KLHL30-AS1Q8NEE0 82 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 TMEM203Q969S6 136 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 SULT4A1Q9BR01 284 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 FAAP24Q9BTP7 215 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 GPR61Q9BZJ8 451 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 PLSCR3Q9NRY6 295 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 ABRACLQ9P1F3 81 aa10.16□□□□□ -0.78
CHD3-206ENST00000452447 YPEL1O60688 119 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 TNFAIP8O95379 198 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 UCHL1P09936 223 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 PPP1CCP36873 323 aaKnown RBP10.15□□□□□ -0.78
CHD3-206ENST00000452447 THBS3P49746 956 aa10.15□□□□□ -0.78
CHD3-206ENST00000452447 GNMTQ14749 295 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms