RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SOCS1O15524 211 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 GAPDHP04406 335 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 SNRNP70P08621 437 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 CD28P10747 220 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 ARHGDIBP52566 201 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 HTD2P86397 168 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 C2orf76Q3KRA6 126 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 MORN2Q502X0 79 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 LY6G6FQ5SQ64 297 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 Q8N6K4 173 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 OR51D1Q8NGF3 324 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 OR10X1Q8NGY0 326 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 FAM3DQ96BQ1 224 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 NEDD4LQ96PU5 975 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 V9GY05 133 aa11.19□□□□□ -0.62
RTFDC1-204ENST00000449062 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 SH2D7A6NKC9 451 aaPredicted RBP11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 CCRL2O00421 344 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 HSD17B6O14756 317 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 ARSBP15848 533 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 GALP22466 123 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 BLVRBP30043 206 aaPredicted RBP11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 PSMD7P51665 324 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 CLDN12P56749 244 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 CD83Q01151 205 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 PLA2G7Q13093 441 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 RAB11BQ15907 218 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 ABCA11PQ4W5N1 156 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 OR52L2PQ8NGH6 319 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 RTN4IP1Q8WWV3 396 aaPredicted RBP11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 AKR1E2Q96JD6 320 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 PLSCR3Q9NRY6 295 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 HSF4Q9ULV5 492 aa11.18□□□□□ -0.62
RTFDC1-204ENST00000449062 ZNF736B4DX44 427 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 M0QZK8 103 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 VDAC2P45880 294 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 REG1BP48304 166 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 HNF4GQ14541 408 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 GNMTQ14749 295 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 HMGN3Q15651 99 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 C2orf68Q2NKX9 166 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 NR2C2APQ86WQ0 139 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 ODF3L1Q8IXM7 274 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 OR10V1Q8NGI7 309 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 PLGRKTQ9HBL7 147 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 RAB9BQ9NP90 201 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 OR2S2Q9NQN1 319 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 KCNIP1Q9NZI2 227 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 GNG12Q9UBI6 72 aa11.17□□□□□ -0.62
RTFDC1-204ENST00000449062 YPEL1O60688 119 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 LPLP06858 475 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 CSF1P09603 554 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 CD1BP29016 333 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 FGF9P31371 208 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 OR10A3P58181 314 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 PLAC9Q5JTB6 97 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 IZUMO1Q8IYV9 350 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 FAM110DQ8TAY7 271 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 YPEL2Q96QA6 119 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 URM1Q9BTM9 101 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 Q9H521 79 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 STEAP1Q9UHE8 339 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 KCNK7Q9Y2U2 307 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 MOB4Q9Y3A3 225 aa11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 PRKDCP78527 4128 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-204ENST00000449062 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 TMEM272A0A1B0GTI8 110 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 IFITM5A6NNB3 132 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 FGF16O43320 207 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 KCNAB3O43448 404 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 LANCL1O43813 399 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 FBXO24O75426 580 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 LYG1Q8N1E2 194 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 GALMQ96C23 342 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 ARHGAP5-AS1Q96IT6 56 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 HDHD3Q9BSH5 251 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 RIMS4Q9H426 269 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 AK3Q9UIJ7 227 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 JPT1Q9UK76 154 aa11.15□□□□□ -0.62
RTFDC1-204ENST00000449062 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 WIPF1O43516 503 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 TMEM11P17152 192 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms