RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ASCL4Q6XD76 172 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 ZNF497Q6ZNH5 498 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 ZNF439Q8NDP4 499 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 OR1L1Q8NH94 360 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 ELOVL1Q9BW60 279 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 IFT22Q9H7X7 185 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 SNTNA6NMZ2 147 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 MCRIP1C9JLW8 97 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 E9PI62 339 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 LANCL1O43813 399 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 HBZP02008 142 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 LGALS1P09382 135 aaKnown RBP13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 ARSBP15848 533 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 ZNF93P35789 620 aaPredicted RBP13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 VEGFCP49767 419 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 ZNF137PP52743 207 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 GBX2P52951 348 aaPredicted RBP13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 LINC00596Q86U02 117 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 ANKRD13BQ86YJ7 626 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 FLYWCH2Q96CP2 140 aaKnown RBP13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 SPATA25Q9BR10 227 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 OR2S2Q9NQN1 319 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 PAK1IP1Q9NWT1 392 aaPredicted RBP13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 ETAA1Q9NY74 926 aa13.89□□□□□ -0.19
CHCHD3-203ENST00000448878 SAC3D1A6NKF1 404 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 IFNA6P05013 189 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 CD2P06729 351 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 PPP3R1P63098 170 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 PLGLAQ15195 96 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 SLC22A6Q4U2R8 563 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 NHLRC3Q5JS37 347 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 C6orf183Q5T699 404 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 DDI2Q5TDH0 399 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 MEDAGQ5VYS4 303 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 Q8N1Y9 231 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 MINDY2Q8NBR6 621 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 LGALS12Q96DT0 336 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 MS4A10Q96PG2 267 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 JAM3Q9BX67 310 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 CST11Q9H112 138 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 AASSQ9UDR5 926 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 OAZ3Q9UMX2 235 aa13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 FOXA2Q9Y261 457 aaPredicted RBP13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 EXOGQ9Y2C4 368 aaKnown RBP13.88□□□□□ -0.19
CHCHD3-203ENST00000448878 A0A1W2PP11 408 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 HSPB1P04792 205 aaKnown RBP13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 GTF2F2P13984 249 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 LYPD6Q86Y78 171 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 SYS1Q8N2H4 156 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 MRPL20Q9BYC9 149 aaKnown RBP13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 TMEM138Q9NPI0 162 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 IL36GQ9NZH8 169 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 STUB1Q9UNE7 303 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 ORC6Q9Y5N6 252 aa13.87□□□□□ -0.19
CHCHD3-203ENST00000448878 HSPA12AO43301 675 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 SOX15O60248 233 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 FCGR1AP12314 374 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 RCC1P18754 421 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 CD40LGP29965 261 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 ADARB1P78563 741 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 MRPL28Q13084 256 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 TMEM30BQ3MIR4 351 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 ZIK1Q3SY52 487 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 MORN2Q502X0 79 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 STEAP3Q658P3 488 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 ZNF529Q6P280 563 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 OR52L2PQ8NGH6 319 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 GPR148Q8TDV2 347 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 SLC7A6OSQ96CW6 309 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 MRPS24Q96EL2 167 aaKnown RBP13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 NABP2Q9BQ15 211 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 TMED9Q9BVK6 235 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 TUBA4BQ9H853 241 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 TPSG1Q9NRR2 321 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 FBXO7Q9Y3I1 522 aa13.86□□□□□ -0.19
CHCHD3-203ENST00000448878 ZNF780AO75290 641 aaPredicted RBP13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 BDKRB2P30411 391 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 GTF2A1P52655 376 aaPredicted RBP13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 TPPP2P59282 170 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 SNRPGP62308 76 aaKnown RBP13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 GNMTQ14749 295 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 LRRC36Q1X8D7 754 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 TMEM106AQ96A25 262 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 ABHD14AQ9BUJ0 271 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 FBXL15Q9H469 300 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 TAF9BQ9HBM6 251 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 AMBNQ9NP70 447 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 KCNIP1Q9NZI2 227 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 PEX16Q9Y5Y5 336 aa13.85□□□□□ -0.19
CHCHD3-203ENST00000448878 FADS2O95864 444 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-203ENST00000448878 PPP1CCP36873 323 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-203ENST00000448878 NDPQ00604 133 aa13.84□□□□□ -0.19
CHCHD3-203ENST00000448878 HAGHQ16775 308 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms