RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MED12LQ86YW9 2145 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 CXorf65A6NEN9 183 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 GPX4P36969 197 aaPredicted RBP11.59□□□□□ -0.55
POLR1B-209ENST00000448770 WNT5AP41221 380 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 OR8G1Q15617 311 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
POLR1B-209ENST00000448770 TIPARPQ7Z3E1 657 aaKnown RBP11.59□□□□□ -0.55
POLR1B-209ENST00000448770 STX12Q86Y82 276 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
POLR1B-209ENST00000448770 DLL3Q9NYJ7 618 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 A0A1W2PR80 420 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 CD300LBA8K4G0 201 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 SEC14L6B5MCN3 397 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 HBE1P02100 147 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 RND2P52198 227 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 OR2T2Q6IF00 324 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 PRR18Q8N4B5 295 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 OR5P3Q8WZ94 311 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 POM121L2Q96KW2 1035 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 CABLES2Q9BTV7 478 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 CISD1Q9NZ45 108 aaKnown RBP11.59□□□□□ -0.55
POLR1B-209ENST00000448770 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
POLR1B-209ENST00000448770 IGKV3D-15A0A087WSY6 115 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 PGA5P0DJD9 388 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 S100A2P29034 98 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 LHX2P50458 406 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 C3AR1Q16581 482 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 SLC25A24Q6NUK1 477 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 MKXQ8IYA7 352 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 OR10G4Q8NGN3 311 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 POM121Q96HA1 1249 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 PFDN5Q99471 154 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 SDF2L1Q9HCN8 221 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 DFFBO76075 338 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 SERPINE2P07093 398 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 ELLP55199 621 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-209ENST00000448770 CLDN18P56856 261 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 HOXA4Q00056 320 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-209ENST00000448770 GAMTQ14353 236 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.56
POLR1B-209ENST00000448770 COL27A1Q8IZC6 1860 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 DIDO1Q9BTC0 2240 aaKnown RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 SYNGR2O43760 224 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 IFNA5P01569 189 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 FABP4P15090 132 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 ZXDAP98168 799 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 SPATA46Q5T0L3 261 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 Q6P435 159 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 FAM180AQ6UWF9 173 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 WDR86Q86TI4 376 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 VASH2Q86V25 355 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 OR10V1Q8NGI7 309 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 SNIP1Q8TAD8 396 aaKnown RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 APOBEC3DQ96AK3 386 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 RBKSQ9H477 322 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 PSENENQ9NZ42 101 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 ARHGAP21Q5T5U3 1957 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 TRBV6-6A0A0A6YYG2 114 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 IGHV3-64DA0A0J9YX35 117 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 HMGB3O15347 200 aaKnown RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 CNOT4O95628 575 aaKnown RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 CYB5R3P00387 301 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-209ENST00000448770 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 NRN1LQ496H8 165 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 TMEM105Q8N8V8 129 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 OR5A2Q8NGI9 324 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 SNX22Q96L94 193 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 OR4C12Q96R67 309 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 SIT1Q9Y3P8 196 aa11.57□□□□□ -0.56
POLR1B-209ENST00000448770 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-209ENST00000448770 PPP1R2P9O14990 202 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 MDH2P40926 338 aaKnown RBP11.56□□□□□ -0.56
POLR1B-209ENST00000448770 NKX6-1P78426 367 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-209ENST00000448770 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 WDR25Q64LD2 544 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-209ENST00000448770 FAM58AQ8N1B3 248 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 RNASE11Q8TAA1 199 aaKnown RBP11.56□□□□□ -0.56
POLR1B-209ENST00000448770 CT55Q8WUE5 264 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 LINC00470Q9BZP3 86 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 PLK3Q9H4B4 646 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 ZNF703Q9H7S9 590 aaPredicted RBP11.56□□□□□ -0.56
POLR1B-209ENST00000448770 KMT2EQ8IZD2 1858 aa11.56□□□□□ -0.56
POLR1B-209ENST00000448770 CEBPZOSA8MTT3 80 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 NEURL1O76050 574 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 SLC25A6P12236 298 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 ZNF16P17020 682 aaPredicted RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 CA6P23280 308 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 CYB561P49447 251 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 CD81P60033 236 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 ZNF600Q6ZNG1 722 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 NUFIP2Q7Z417 695 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 C1orf87Q8N0U7 546 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 GATAD1Q8WUU5 269 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 C5orf30Q96GV9 206 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms