RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PSG2P11465 335 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 TPT1P13693 172 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 CD200P41217 278 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 SNTB1Q13884 538 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 SLC35E4Q6ICL7 350 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 FAM53AQ6NSI3 398 aaPredicted RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 EIF4E3Q8N5X7 224 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR52L2PQ8NGH6 319 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 RND1Q92730 232 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 COQ2Q96H96 371 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 A0A1B0GWJ7 208 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 OOEPA6NGQ2 149 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 FAM74A7A6NL05 159 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 C12orf77C9JDV5 145 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 ADAM20O43506 726 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 CDS2O95674 445 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 APOC3P02656 99 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 HEXAP06865 529 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 SERPINE2P07093 398 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 F2RP25116 425 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 HOXA1P49639 335 aaPredicted RBP7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 UCNP55089 124 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 TNFAIP6P98066 277 aaPredicted RBP7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 HMGN3Q15651 99 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 LTC4SQ16873 150 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 FAM74A3Q4VXF1 159 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 FAM201AQ5SY85 155 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 RFESDQ8TAC1 157 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM56Q96MV1 263 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 SLC25A32Q9H2D1 315 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 CYTL1Q9NRR1 136 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM56-RWDD3S4R434 201 aa7.99□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGLV3-9A0A075B6K5 115 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 IFNL4K9M1U5 179 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 ST8SIA3O43173 380 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 HBZP02008 142 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 SSTR5P35346 364 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 BSPH1Q075Z2 132 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 BAP18Q8IXM2 172 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 GCSAMQ8N6F7 178 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 RNASE11Q8TAA1 199 aaKnown RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 NINJ1Q92982 152 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 ARL11Q969Q4 196 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 C12orf57Q99622 126 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 DCTN5Q9BTE1 182 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 HEATR1Q9H583 2144 aaKnown RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGKV1D-17A0A075B6S4 117 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGHV3-43A0A0B4J1X8 118 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 DPRXA6NFQ7 191 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 DEFB108AA8MXU0 73 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 SRRM5B3KS81 715 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 E5RGE8 158 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 NPIPB11E5RHQ5 1161 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 H0Y980 276 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGLV2-14P01704 120 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGHV3-43DP0DP04 118 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 EPHA1P21709 976 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 PTAFRP25105 342 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 UCP1P25874 307 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 RPL35P42766 123 aaKnown RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM33P57088 247 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 S100A12P80511 92 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 GNMTQ14749 295 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 RPL7L1Q6DKI1 246 aaKnown RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 ZNRF1Q8ND25 227 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 DEFB108BQ8NET1 73 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR13A1Q8NGR1 328 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 PHYHIPLQ96FC7 376 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 MAGT1Q9H0U3 335 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 RCL1Q9Y2P8 373 aaKnown RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 NSG2Q9Y328 171 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 MAP1BP46821 2468 aaKnown RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 RP1L1Q8IWN7 2480 aaPredicted RBP7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 CEP295Q9C0D2 2601 aa7.98□□□□□ -1.13
COL6A4P1-201ENST00000446690 SIGLEC5O15389 551 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGHV1-46P01743 117 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 THBDP07204 575 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR4A8P0C604 315 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 CD80P33681 288 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 EDDM3BP56851 147 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 CXorf66Q5JRM2 361 aaPredicted RBP7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 ADAM5Q6NVV9 412 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 ZCCHC24Q8N2G6 241 aaKnown RBP7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 ZNF808Q8N4W9 903 aaPredicted RBP7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR5D13Q8NGL4 314 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR4D5Q8NGN0 318 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 PLPPR2Q96GM1 343 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 WFIKKN1Q96NZ8 548 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 SSSCA1O60232 199 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 CYB5R3P00387 301 aaPredicted RBP7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 VDAC1P21796 283 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 TNFSF4P23510 183 aa7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 PPP1CCP36873 323 aaKnown RBP7.97□□□□□ -1.13
COL6A4P1-201ENST00000446690 AKR1D1P51857 326 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms