RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GAGE1Q13065 139 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 TECRQ9NZ01 308 aaKnown RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 ZFP30Q9Y2G7 519 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 CEACAM1P13688 526 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 CAMPP49913 170 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 MFAP2P55001 183 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 OR10S1Q8NGN2 331 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 EDARADDQ8WWZ3 215 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 IGKV1-8A0A0C4DH67 115 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 VSTM5A8MXK1 200 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 HRKO00198 91 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 SIRPB1O00241 398 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 EML2O95834 649 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 SELLP14151 372 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 PIGYQ3MUY2 71 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 DPF1Q92782 380 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 HS3ST3A1Q9Y663 406 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 IGKV1D-16P01601 117 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 IGFBP7Q16270 282 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 ASAH2BP0C7U1 165 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 RALYQ9UKM9 306 aaKnown RBP6.87□□□□□ -1.31
SMG1-202ENST00000446231 UMODP07911 640 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 ABHD5Q8WTS1 349 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 TOGARAM1Q9Y4F4 1720 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 GBF1Q92538 1859 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 TNFSF14O43557 240 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 BPIFB3P59826 476 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 DCDP81605 110 aaKnown RBP6.87□□□□□ -1.31
SMG1-202ENST00000446231 BHLHE23Q8NDY6 225 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 K7N7A8 449 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 CSN1S1P47710 185 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 EDDM3AQ14507 147 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 WNT10AQ9GZT5 417 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 OR5B21A6NL26 309 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 OR1C1Q15619 314 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 ZBP1Q9H171 429 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 SLC7A10Q9NS82 523 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 PRAMEF20Q5VT98 475 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 CCL4L1Q8NHW4 92 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 SSMEM1Q8WWF3 244 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 R3HDM4Q96D70 268 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 TMEM30CPA0ZSE6 113 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 CXCL1P09341 107 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 S100A7AQ86SG5 101 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 ATOH7Q8N100 152 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 OR11L1Q8NGX0 322 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 OR2T6Q8NHC8 308 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 HSD17B10Q99714 261 aaKnown RBP6.87□□□□□ -1.31
SMG1-202ENST00000446231 TMEM38BQ9NVV0 291 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 MT-ND6P03923 174 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 FAM53BQ14153 422 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 GALMQ96C23 342 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 NRN1Q9NPD7 142 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 ISG15P05161 165 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 CBLN3Q6UW01 205 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 OR1K1Q8NGR3 316 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 A0A087WV48 116 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 CORTO00230 105 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 SRIP30626 198 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 ZNF816Q0VGE8 651 aaPredicted RBP6.87□□□□□ -1.31
SMG1-202ENST00000446231 SSX8Q7RTT4 187 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 AMELYQ99218 206 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 FOCADQ5VW36 1801 aa6.87□□□□□ -1.31
SMG1-202ENST00000446231 APOBEC3DQ96AK3 386 aaPredicted RBP6.86□□□□□ -1.31
SMG1-202ENST00000446231 A0A096LPE4 126 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 MTURNQ8N3F0 131 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 NOXO1Q8NFA2 376 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 UQCRFS1P47985 274 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 HS3ST3B1Q9Y662 390 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 ZNF77Q15935 545 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 LINC01590Q5TEZ4 76 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 GUCD1Q96NT3 240 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 NUDT3O95989 172 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 CADM4Q8NFZ8 388 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.86□□□□□ -1.31
SMG1-202ENST00000446231 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 CISD3P0C7P0 127 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 OR2Y1Q8NGV0 311 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 C18orf12Q96KH6 178 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 IMMP2LQ96T52 175 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 ARR3P36575 388 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 BOKQ9UMX3 212 aaPredicted RBP6.86□□□□□ -1.31
SMG1-202ENST00000446231 GNG7O60262 68 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 IL9P15248 144 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 SELEP16581 610 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 TMEM242Q9NWH2 141 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 NPSP0C0P6 89 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 LDLRAD2Q5SZI1 272 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 OR10V1Q8NGI7 309 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 MAST2Q6P0Q8 1798 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 BTF3P20290 206 aaKnown RBP6.86□□□□□ -1.31
SMG1-202ENST00000446231 ZNF391Q9UJN7 358 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 ZFYVE26Q68DK2 2539 aa6.86□□□□□ -1.31
SMG1-202ENST00000446231 WDR74Q6RFH5 385 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms