RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 YKT6O15498 198 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 CHRNA7P36544 502 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 OR1C1Q15619 314 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 CEACAM21Q3KPI0 293 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
MSH6-204ENST00000445503 PIGBOS1A0A0B4J2F0 54 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 KLF7O75840 302 aaPredicted RBP10.16□□□□□ -0.78
MSH6-204ENST00000445503 OR3A1P47881 315 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 OR10P1Q8NGE3 313 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 RHBDL1O75783 438 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 SCGB1D1O95968 90 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 BCL2P10415 239 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 FOLR2P14207 255 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 CEBPDP49716 269 aaPredicted RBP10.16□□□□□ -0.78
MSH6-204ENST00000445503 ICAM4Q14773 271 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 H2BFWTQ7Z2G1 175 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 MEGF10Q96KG7 1140 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 SEMA5BQ9P283 1151 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 GNG12Q9UBI6 72 aa10.16□□□□□ -0.78
MSH6-204ENST00000445503 SH2D1BO14796 132 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 HSPB1P04792 205 aaKnown RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 G6PCP35575 357 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 CATR1Q13166 79 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 OR8G1Q15617 311 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 TPRX1Q8N7U7 411 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 OR4C12Q96R67 309 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 TUBA4BQ9H853 241 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 CLN8Q9UBY8 286 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 KLF2Q9Y5W3 355 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 ZNF716A6NP11 495 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 MDH2P40926 338 aaKnown RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 FABP6P51161 128 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 TMEM241Q24JQ0 296 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 FFAR4Q5NUL3 377 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 OR2D2Q9H210 308 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 VSIRQ9H7M9 311 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 DEPPQ9NTK1 212 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 RNF212BA8MTL3 300 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 H0Y980 276 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 ETV2O00321 342 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 CYTIPO60759 359 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 PMELP40967 661 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 TBC1D28Q2M2D7 210 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 PDLIM3Q53GG5 364 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 ZNF385CQ66K41 422 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 OR5A2Q8NGI9 324 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 PACRGQ96M98 296 aaPredicted RBP10.15□□□□□ -0.78
MSH6-204ENST00000445503 FAM173AQ9BQD7 235 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 DLL3Q9NYJ7 618 aa10.15□□□□□ -0.78
MSH6-204ENST00000445503 LRP5LA4QPB2 252 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 CXorf65A6NEN9 183 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 TMEM50AO95807 157 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 ERVFRD-1P60508 538 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 HEPN1Q6WQI6 88 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 LRTM2Q8N967 370 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 MUCL1Q96DR8 90 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 ARV1Q9H2C2 271 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 RNF122Q9H9V4 155 aa10.15□□□□□ -0.79
MSH6-204ENST00000445503 HEYLQ9NQ87 328 aaPredicted RBP10.15□□□□□ -0.79
MSH6-204ENST00000445503 A0A1B0GU03 582 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 PINLYPA6NC86 204 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 DNPH1O43598 174 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 PDGFBP01127 241 aaPredicted RBP10.14□□□□□ -0.79
MSH6-204ENST00000445503 MBP02144 154 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 UCP1P25874 307 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 RNF151Q2KHN1 245 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 Q3ZCU0 254 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 SSC4DQ8WTU2 575 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 PRSS50Q9UI38 385 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 OR5H1A6NKK0 313 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 TIMM8AO60220 97 aaPredicted RBP10.14□□□□□ -0.79
MSH6-204ENST00000445503 GALR1P47211 349 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 EDDM3BP56851 147 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 TGFBR3Q03167 851 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 OR10G9Q8NGN4 311 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 OR10G7Q8NGN6 311 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 DUSP13Q9UII6 198 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 USP34Q70CQ2 3546 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.14□□□□□ -0.79
MSH6-204ENST00000445503 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 LYZL6O75951 148 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 CRYAAP02489 173 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 GLIPR1P48060 266 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 SLC10A1Q14973 349 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 BSXQ3C1V8 233 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 RIPPLY2Q5TAB7 128 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 PPP1R32Q7Z5V6 425 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 OR5D13Q8NGL4 314 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 CLDND2Q8NHS1 167 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 TAAR9Q96RI9 348 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 OR51I2Q9H344 312 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 RBKSQ9H477 322 aa10.14□□□□□ -0.79
MSH6-204ENST00000445503 TMEM9BQ9NQ34 198 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms