RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 OR5K1Q8NHB7 308 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 ZNRF2Q8NHG8 242 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 CCL17Q92583 94 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 ANKRD36BP1Q96IX9 119 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 SLC35E1Q96K37 410 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 BMFQ96LC9 184 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 DNAJC30Q96LL9 226 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 SPACA5Q96QH8 159 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 C2orf88Q9BSF0 95 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 TMEM70Q9BUB7 260 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 CCDC32Q9BV29 185 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 GNB1LQ9BYB4 327 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 SLC25A22Q9H936 323 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 LYRM2Q9NU23 88 aaPredicted RBP3.38□□□□□ -1.87
VPS50-206ENST00000443443 C14orf105Q9NVL8 296 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 MARCH5Q9NX47 278 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 MRPL27Q9P0M9 148 aaKnown RBP3.38□□□□□ -1.87
VPS50-206ENST00000443443 COPZ2Q9P299 210 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 SSR3Q9UNL2 185 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 INSIG2Q9Y5U4 225 aa3.38□□□□□ -1.87
VPS50-206ENST00000443443 CAMTA1Q9Y6Y1 1673 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 IGKV6D-21A0A0A0MT36 114 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 TRAV8-3A0A0A6YYJ7 113 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 hADV38S2A0JD32 116 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 PLAC8L1A1L4L8 177 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 K7EP13 123 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 LYPLA1O75608 230 aaPredicted RBP3.37□□□□□ -1.87
VPS50-206ENST00000443443 CCNE2O96020 404 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 CA2P00918 260 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 APOA2P02652 100 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 IGHV3-43DP0DP04 118 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 GADD45AP24522 165 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 ZNF138P52744 262 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 GFERP55789 205 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 SYNJ2BPP57105 145 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 CKS1BP61024 79 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 HLA-DRB3P79483 266 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 NDPQ00604 133 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 DEFA6Q01524 100 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 PNOCQ13519 176 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 C9orf64Q5T6V5 341 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 HENMT1Q5T8I9 393 aaKnown RBP3.37□□□□□ -1.87
VPS50-206ENST00000443443 ALKAL1Q6UXT8 129 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 GOLT1AQ6ZVE7 132 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 TMEM179BQ7Z7N9 219 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 DCAKDQ8WVC6 231 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 L3HYPDHQ96EM0 354 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 CYYR1Q96J86 154 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 FOPNLQ96NB1 174 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 PRSS27Q9BQR3 290 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 EFCAB11Q9BUY7 163 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 C19orf24Q9BVV8 132 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 EIF5A2Q9GZV4 153 aaKnown RBP3.37□□□□□ -1.87
VPS50-206ENST00000443443 SH3BGRL3Q9H299 93 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 TMEM216Q9P0N5 145 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 JPT1Q9UK76 154 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 PRNDQ9UKY0 176 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 FLVCR1Q9Y5Y0 555 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 DENND4AQ7Z401 1863 aa3.37□□□□□ -1.87
VPS50-206ENST00000443443 SETD5Q9C0A6 1442 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 PHF3Q92576 2039 aaKnown RBP3.36□□□□□ -1.87
VPS50-206ENST00000443443 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 LOC389332A0A1B0GUA5 103 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 A0A1W2PRE2 83 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 GCM2O75603 506 aaPredicted RBP3.36□□□□□ -1.87
VPS50-206ENST00000443443 CDRT1O95170 752 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 GADD45GO95257 159 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 OR56A5P0C7T3 313 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 CECR9P0C854 216 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 CTLA4P16410 223 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 S100A7P31151 101 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 GLRXP35754 106 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 CDKN2BP42772 138 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 LYZP61626 148 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 RPS24P62847 133 aaKnown RBP3.36□□□□□ -1.87
VPS50-206ENST00000443443 GNG5P63218 68 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 FABP5Q01469 135 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 JOSD1Q15040 202 aaPredicted RBP3.36□□□□□ -1.87
VPS50-206ENST00000443443 RBMY1FQ15415 496 aaKnown RBP3.36□□□□□ -1.87
VPS50-206ENST00000443443 FBXL19-AS1Q494R0 122 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 TCEAL5Q5H9L2 206 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 UBE2NLQ5JXB2 153 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 FAM222AQ5U5X8 452 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 PLET1Q6UQ28 207 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 IGFL2Q6UWQ7 119 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 Q6ZSR6 202 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 STRADAQ7RTN6 431 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 TMEM61Q8N0U2 210 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 OSR2Q8N2R0 312 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 OR11H6Q8NGC7 330 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 OR8S1Q8NH09 359 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 LHFPL5Q8TAF8 219 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 C1orf54Q8WWF1 131 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 TCEAL3Q969E4 200 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 EXOSC8Q96B26 276 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms