RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CIB1Q99828 191 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 ELOVL1Q9BW60 279 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 GABARAPL3Q9BY60 117 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-208ENST00000443046 A0A1W2PN81 502 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 J3QLW9 94 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 AIPO00170 330 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 CDRT1O95170 752 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 ARSBP15848 533 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 ZNF19P17023 458 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 RAB3AP20336 220 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 CHRNA7P36544 502 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 RAB40BQ12829 278 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 ATP6AP1Q15904 470 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 MPV17LQ2QL34 196 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 SLC25A30Q5SVS4 291 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 ZNF660Q6AZW8 331 aaPredicted RBP11□□□□□ -0.65
HMGN1-208ENST00000443046 CD200R1LQ6Q8B3 271 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 IL34Q6ZMJ4 242 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 SATL1Q86VE3 508 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 GPER1Q99527 375 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 NABP2Q9BQ15 211 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 CST11Q9H112 138 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 GNG12Q9UBI6 72 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 POMPQ9Y244 141 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 ERGIC3Q9Y282 383 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
HMGN1-208ENST00000443046 SPINT2O43291 252 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 IGHV3-11P01762 117 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 HBZP02008 142 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 MORN2Q502X0 79 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 PYHIN1Q6K0P9 492 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 ANKRD13BQ86YJ7 626 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 ACBD7Q8N6N7 88 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 OR10V1Q8NGI7 309 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 OR1L1Q8NH94 360 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 TRUB1Q8WWH5 349 aaKnown RBP10.99□□□□□ -0.65
HMGN1-208ENST00000443046 PDCD1LG2Q9BQ51 273 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 FAM192AQ9GZU8 254 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 METTL9Q9H1A3 318 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 HIPK2Q9H2X6 1198 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 RCC2Q9P258 522 aaKnown RBP10.99□□□□□ -0.65
HMGN1-208ENST00000443046 DHDHQ9UQ10 334 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 EXOGQ9Y2C4 368 aaKnown RBP10.99□□□□□ -0.65
HMGN1-208ENST00000443046 GMPPBQ9Y5P6 360 aa10.99□□□□□ -0.65
HMGN1-208ENST00000443046 TMEM212A6NML5 194 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 MAGEB3O15480 346 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 GNGT1P63211 74 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 CX3CL1P78423 397 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 LRRC36Q1X8D7 754 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 ATAD3CQ5T2N8 411 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 SYT6Q5T7P8 510 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-208ENST00000443046 ZDHHC13Q8IUH4 622 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 SYS1Q8N2H4 156 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 OR5AK2Q8NH90 309 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
HMGN1-208ENST00000443046 ISG20L2Q9H9L3 353 aaKnown RBP10.98□□□□□ -0.65
HMGN1-208ENST00000443046 RAB9BQ9NP90 201 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 ING4Q9UNL4 249 aa10.98□□□□□ -0.65
HMGN1-208ENST00000443046 E9PI62 339 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 RGS11O94810 467 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 GYS2P54840 703 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 ADARB1P78563 741 aaKnown RBP10.97□□□□□ -0.65
HMGN1-208ENST00000443046 KLF5Q13887 457 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-208ENST00000443046 AKIRIN2Q53H80 203 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 ZNF833PQ6ZTB9 187 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 RGP1Q92546 391 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-208ENST00000443046 JAM3Q9BX67 310 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 RETNQ9HD89 108 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 TAS2R4Q9NYW5 299 aa10.97□□□□□ -0.65
HMGN1-208ENST00000443046 H0Y980 276 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 FCN1O00602 326 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 CSTBP04080 98 aaKnown RBP10.96□□□□□ -0.65
HMGN1-208ENST00000443046 RCC1P18754 421 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-208ENST00000443046 TMEM267Q0VDI3 215 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-208ENST00000443046 LY6G6FQ5SQ64 297 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 C6orf183Q5T699 404 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 LHFPL3Q86UP9 236 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 STX19Q8N4C7 294 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 OR4K15Q8NH41 348 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 TSEN15Q8WW01 171 aaKnown RBP10.96□□□□□ -0.65
HMGN1-208ENST00000443046 LGALS12Q96DT0 336 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 ABHD14AQ9BUJ0 271 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 RSRP1Q9BUV0 290 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 ALG8Q9BVK2 526 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 SLA2Q9H6Q3 261 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 OR2S2Q9NQN1 319 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 CNOT2Q9NZN8 540 aaKnown RBP10.96□□□□□ -0.65
HMGN1-208ENST00000443046 TRAPPC2LQ9UL33 140 aa10.96□□□□□ -0.65
HMGN1-208ENST00000443046 A0A1W2PP11 408 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 RRHO14718 337 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 ZNF780AO75290 641 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 SC5DO75845 299 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 SERPINA2P20848 420 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 ZNF93P35789 620 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 OR3A3P47888 321 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms