RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ZNF645Q8N7E2 425 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF680Q8NEM1 530 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 DEFB108BQ8NET1 73 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 OR8U1Q8NH10 309 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ANGPTL6Q8NI99 470 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 LINC01560Q8TB33 94 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 COQ2Q96H96 371 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 C18orf12Q96KH6 178 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF471Q9BX82 626 aaPredicted RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 TOLLIPQ9H0E2 274 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 RAB1BQ9H0U4 201 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 GAL3ST2Q9H3Q3 398 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 LIME1Q9H400 295 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 FAM212BQ9NTI7 297 aaPredicted RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 OR1A1Q9P1Q5 309 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 U3KQ87 197 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 IGKV1D-17A0A075B6S4 117 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 BORCS7-ASMTA0A0B4J1R7 106 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 TRAV39A0A0B4J263 110 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 SHISA9B4DS77 424 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 E7EQL1 145 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 G3V3Q6 166 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 SIGLEC5O15389 551 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 GPR137BO60478 399 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CLDN14O95500 239 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CYB5R3P00387 301 aaPredicted RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 TPT1P13693 172 aaKnown RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 HTR2BP41595 481 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 KIR2DS2P43631 304 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 GPR12P47775 334 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 AKR1C2P52895 323 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CCL8P80075 99 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 MEF2CQ06413 473 aaPredicted RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 RAB32Q13637 225 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 HFEQ30201 348 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 STUMQ69YW2 141 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 C20orf204Q6ZNR8 217 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 LDLRAD3Q86YD5 345 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 OR1S1Q8NH92 325 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 LRRC20Q8TCA0 184 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CD300LFQ8TDQ1 290 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 FAM210AQ96ND0 272 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 SLC25A31Q9H0C2 315 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 IGKV1D-13A0A0B4J2D9 117 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 K7EPK0 472 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 ITGB1BP1O14713 200 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 ZNF205O95201 554 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 IGKV1-13P0DP09 117 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 SLC25A6P12236 298 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 MMP9P14780 707 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 NDUFB7P17568 137 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 NKX2-1P43699 371 aaPredicted RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 ZNF788Q6ZQV5 615 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 OR8H3Q8N146 312 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 FAM71E2Q8N5Q1 922 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 OR10A7Q8NGE5 316 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 OR51H1Q8NH63 302 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 SCARB1Q8WTV0 552 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 GLYATL2Q8WU03 294 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 MSI2Q96DH6 328 aaKnown RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 TIMD4Q96H15 378 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CYYR1Q96J86 154 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 HSD17B10Q99714 261 aaKnown RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 TMEM106BQ9NUM4 274 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 TAS2R3Q9NYW6 316 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CALYQ9NYX4 217 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 CACFD1Q9UGQ2 172 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 A0A1B0GU03 582 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 A0A1W2PPH5 198 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 MED19A0JLT2 244 aaPredicted RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 GOSR1O95249 250 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 LYL1P12980 280 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 PPOXP50336 477 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 ZNF672Q499Z4 452 aaPredicted RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 GPR157Q5UAW9 335 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 Q6ZPA2 131 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 FAM219AQ8IW50 185 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 FOXRED2Q8IWF2 684 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 SELENOHQ8IZQ5 122 aaKnown RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 MUC15Q8N387 334 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 OR13A1Q8NGR1 328 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 LSM10Q969L4 123 aaKnown RBP5.04□□□□□ -1.6
VPS50-205ENST00000441602 PHYHIPLQ96FC7 376 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 ADTRPQ96IZ2 230 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 OR10C1Q96KK4 312 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 PRR13Q9NZ81 148 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 PRELID3BQ9Y3B1 194 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 POMT1Q9Y6A1 747 aa5.04□□□□□ -1.6
VPS50-205ENST00000441602 IGHV1-69-2A0A0G2JMI3 117 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 TMEM178BH3BS89 294 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 ADAM20O43506 726 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 YPEL1O60688 119 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 MED6O75586 246 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 LY86O95711 162 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 RPL23AP62750 156 aaKnown RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 LYZL2Q7Z4W2 148 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 SLC35G3Q8N808 338 aa5.03□□□□□ -1.6
VPS50-205ENST00000441602 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.03□□□□□ -1.6
VPS50-205ENST00000441602 OR52L2PQ8NGH6 319 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms