RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CFHR4Q92496 578 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 RBM14Q96PK6 669 aaKnown RBP18.91■□□□□ 0.62
VARS-217ENST00000440048 SLC25A33Q9BSK2 321 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 SERTAD4Q9NUC0 356 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 TXNL4BQ9NX01 149 aaKnown RBP18.91■□□□□ 0.62
VARS-217ENST00000440048 IFITM5A6NNB3 132 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 FAM90A9PA6NNJ1 464 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 HSD17B6O14756 317 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 NAPSAO96009 420 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 FGF9P31371 208 aaPredicted RBP18.9■□□□□ 0.62
VARS-217ENST00000440048 VEGFCP49767 419 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 TMEM50BP56557 158 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 ZNF816Q0VGE8 651 aaPredicted RBP18.9■□□□□ 0.62
VARS-217ENST00000440048 PLA2G7Q13093 441 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 THNSL2Q86YJ6 484 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 KLHDC1Q8N7A1 406 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 OR2S2Q9NQN1 319 aa18.9■□□□□ 0.62
VARS-217ENST00000440048 OR2F2O95006 317 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 SNRNP70P08621 437 aaKnown RBP18.89■□□□□ 0.61
VARS-217ENST00000440048 FAM106CPP0CH98 169 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 ZNF134P52741 427 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 HMGN3Q15651 99 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 CT45A1Q5HYN5 189 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 ZNF880Q6PDB4 577 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 Q6ZPA2 131 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 SLC25A48Q6ZT89 311 aaKnown RBP18.89■□□□□ 0.61
VARS-217ENST00000440048 NR2C2APQ86WQ0 139 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 OR52L2PQ8NGH6 319 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 CT45A3Q8NHU0 189 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 ST6GALNAC6Q969X2 333 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 AKR1E2Q96JD6 320 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 CHMP1AQ9HD42 196 aaPredicted RBP18.89■□□□□ 0.61
VARS-217ENST00000440048 AK3Q9UIJ7 227 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 RAB22AQ9UL26 194 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 HSF4Q9ULV5 492 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 MEGF8Q7Z7M0 2845 aa18.89■□□□□ 0.61
VARS-217ENST00000440048 GAPDHP04406 335 aaKnown RBP18.88■□□□□ 0.61
VARS-217ENST00000440048 VSIG10L2P0DP72 767 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 IL3RAP26951 378 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 REG1BP48304 166 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 GNMTQ14749 295 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 HERPUD1Q15011 391 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 NEDD8Q15843 81 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 MORN2Q502X0 79 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 OR56B1Q8NGI3 324 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 ARHGAP5-AS1Q96IT6 56 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 OR51E2Q9H255 320 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 JPT1Q9UK76 154 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 SSR3Q9UNL2 185 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 CMYA5Q8N3K9 4069 aa18.88■□□□□ 0.61
VARS-217ENST00000440048 IGHV1-3A0A0C4DH29 117 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 SMIM30A4D0T7 59 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 HTD2P86397 168 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 TET2Q6N021 2002 aaPredicted RBP18.87■□□□□ 0.61
VARS-217ENST00000440048 TREML4Q6UXN2 200 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 Q6ZTK2 550 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 SETD6Q8TBK2 473 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 GALMQ96C23 342 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 HDHD3Q9BSH5 251 aaPredicted RBP18.87■□□□□ 0.61
VARS-217ENST00000440048 PECRQ9BY49 303 aa18.87■□□□□ 0.61
VARS-217ENST00000440048 RIMS4Q9H426 269 aaPredicted RBP18.87■□□□□ 0.61
VARS-217ENST00000440048 TRBV6-6A0A0A6YYG2 114 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 A0A0B4J203 849 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 M0QZ24 198 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 AMY1AP04745 511 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 AMY2AP04746 511 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 PPP1CCP36873 323 aaKnown RBP18.86■□□□□ 0.61
VARS-217ENST00000440048 TMEM95Q3KNT9 176 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 ARSJQ5FYB0 599 aaPredicted RBP18.86■□□□□ 0.61
VARS-217ENST00000440048 PLAC9Q5JTB6 97 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 STEAP3Q658P3 488 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 MOB1BQ7L9L4 216 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 MOB3BQ86TA1 216 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 RTN4IP1Q8WWV3 396 aaPredicted RBP18.86■□□□□ 0.61
VARS-217ENST00000440048 ABRACLQ9P1F3 81 aa18.86■□□□□ 0.61
VARS-217ENST00000440048 SLC2A2P11168 524 aaPredicted RBP18.85■□□□□ 0.61
VARS-217ENST00000440048 VDAC2P45880 294 aaPredicted RBP18.85■□□□□ 0.61
VARS-217ENST00000440048 ZNF137PP52743 207 aa18.85■□□□□ 0.61
VARS-217ENST00000440048 HES1Q14469 280 aa18.85■□□□□ 0.61
VARS-217ENST00000440048 ABCA11PQ4W5N1 156 aa18.85■□□□□ 0.61
VARS-217ENST00000440048 IGHV3-72A0A0B4J1Y9 119 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 YPEL1O60688 119 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 IGKV1D-33P01593 117 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 IGKV1-33P01594 117 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 TMEM11P17152 192 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 RAB6AP20340 208 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 HNF4GQ14541 408 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 MOGAT2Q3SYC2 334 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 HIST2H2BDQ6DRA6 164 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 TPRA1Q86W33 373 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 C11orf44Q8N8P7 122 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 YPEL2Q96QA6 119 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 CHCHD6Q9BRQ6 235 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 WNT10AQ9GZT5 417 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 MOB4Q9Y3A3 225 aa18.84■□□□□ 0.61
VARS-217ENST00000440048 SH2D7A6NKC9 451 aaPredicted RBP18.83■□□□□ 0.6
VARS-217ENST00000440048 NOTOA8MTQ0 251 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 M0QZK8 103 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 RGS11O94810 467 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 CD36P16671 472 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms