RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ST8SIA5O15466 376 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 SPINT2O43291 252 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 MPC2O95563 127 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 LPCAT3Q6P1A2 487 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 CLEC9AQ6UXN8 241 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
CPSF7-205ENST00000439958 SHISA9B4DS77 424 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 RBMXL2O75526 392 aaKnown RBP12.6□□□□□ -0.39
CPSF7-205ENST00000439958 RPS2P15880 293 aaKnown RBP12.6□□□□□ -0.39
CPSF7-205ENST00000439958 SMCO1Q147U7 214 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 NCMAPQ5T1S8 102 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 C11orf87Q6NUJ2 197 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 PCSK4Q6UW60 755 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 TMUB2Q71RG4 321 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 MOB1BQ7L9L4 216 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 DCHS2Q6V1P9 2916 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 DSCAMO60469 2012 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 F5H0A9 414 aaPredicted RBP12.6□□□□□ -0.39
CPSF7-205ENST00000439958 LGI3Q8N145 548 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 SLA2Q9H6Q3 261 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 HES4Q9HCC6 221 aa12.6□□□□□ -0.39
CPSF7-205ENST00000439958 ODAMA1E959 279 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 RP2O75695 350 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 S100A11P31949 105 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 LINC00205P59089 165 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 GLYATL2Q8WU03 294 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 GON7Q9BXV9 100 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 RAB18Q9NP72 206 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 OOEPA6NGQ2 149 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 HEXAP06865 529 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 C4BPBP20851 252 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 THOC7Q6I9Y2 204 aaKnown RBP12.59□□□□□ -0.39
CPSF7-205ENST00000439958 RBMXL1Q96E39 390 aaKnown RBP12.59□□□□□ -0.39
CPSF7-205ENST00000439958 TRBV6-7A0A0A0MS04 114 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 ADAM20O43506 726 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 CFDP00746 253 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-205ENST00000439958 GNG10P50151 68 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 SHARPINQ9H0F6 387 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 RHOFQ9HBH0 211 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
CPSF7-205ENST00000439958 APOBEC3AP31941 199 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-205ENST00000439958 CYCSP99999 105 aaKnown RBP12.58□□□□□ -0.4
CPSF7-205ENST00000439958 LHFPL5Q8TAF8 219 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 C2orf50Q96LR7 162 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 PLA2G5P39877 138 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 ZNF816Q0VGE8 651 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-205ENST00000439958 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 POM121Q96HA1 1249 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 TLNRD1Q9H1K6 362 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 MS4A5Q9H3V2 200 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 SHPKQ9UHJ6 478 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 CEACAM18A8MTB9 384 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 DHODHQ02127 395 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 PRB3Q04118 309 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-205ENST00000439958 C3orf36Q3SXR2 165 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 Q3ZCU0 254 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 C6orf183Q5T699 404 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 POLQO75417 2590 aa12.58□□□□□ -0.4
CPSF7-205ENST00000439958 DOCK11Q5JSL3 2073 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 MGST3O14880 152 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 PGLYRP1O75594 196 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-205ENST00000439958 RLN2P04090 185 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 TMEM187Q14656 261 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 AVPI1Q5T686 147 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-205ENST00000439958 ZNF680Q8NEM1 530 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 WRBO00258 174 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 RAB14P61106 215 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 TESK1Q15569 626 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 DMRTC2Q8IXT2 367 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-205ENST00000439958 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 ANGPTL6Q8NI99 470 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 TCTEX1D2Q8WW35 142 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 SUCNR1Q9BXA5 334 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 UTP20O75691 2785 aaKnown RBP12.57□□□□□ -0.4
CPSF7-205ENST00000439958 CRYBG3Q68DQ2 2970 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 CLDN14O95500 239 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 EXOSC2Q13868 293 aaKnown RBP12.57□□□□□ -0.4
CPSF7-205ENST00000439958 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 SNX22Q96L94 193 aa12.57□□□□□ -0.4
CPSF7-205ENST00000439958 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 NKX6-3A6NJ46 265 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 PPIAL4DF5H284 164 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 IFNL4K9M1U5 179 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 SIAH2O43255 324 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 PPIAL4FP0DN26 164 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 CAV2P51636 162 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms