RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 GIMAP1Q8WWP7 306 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 ZNF2Q9BSG1 426 aaPredicted RBP17.01■□□□□ 0.31
CHD3-204ENST00000439235 GFOD1Q9NXC2 390 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 KPTNQ9Y664 436 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 ANKRD17O75179 2603 aaKnown RBP17■□□□□ 0.31
CHD3-204ENST00000439235 PTTG1O95997 202 aa17■□□□□ 0.31
CHD3-204ENST00000439235 IGHV1-8P0DP01 117 aa17■□□□□ 0.31
CHD3-204ENST00000439235 NFYAP23511 347 aaPredicted RBP17■□□□□ 0.31
CHD3-204ENST00000439235 DVL1P1P54792 670 aaPredicted RBP17■□□□□ 0.31
CHD3-204ENST00000439235 ERVFRD-1P60508 538 aa17■□□□□ 0.31
CHD3-204ENST00000439235 HERV-K104P61576 105 aa17■□□□□ 0.31
CHD3-204ENST00000439235 DHRS11Q6UWP2 260 aa17■□□□□ 0.31
CHD3-204ENST00000439235 ENKURQ8TC29 256 aa17■□□□□ 0.31
CHD3-204ENST00000439235 TOLLIPQ9H0E2 274 aa17■□□□□ 0.31
CHD3-204ENST00000439235 DPAGT1Q9H3H5 408 aa17■□□□□ 0.31
CHD3-204ENST00000439235 RDH8Q9NYR8 311 aa17■□□□□ 0.31
CHD3-204ENST00000439235 ITGB1BP2Q9UKP3 347 aa17■□□□□ 0.31
CHD3-204ENST00000439235 SESN1Q9Y6P5 492 aa17■□□□□ 0.31
CHD3-204ENST00000439235 CENPEQ02224 2701 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 IGHV3-43A0A0B4J1X8 118 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 TRAV20A0A0B4J274 112 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 YPEL1O60688 119 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 MMP23AO75900 390 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 IGHV3-43DP0DP04 118 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 NFYBP25208 207 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 BTCP35070 178 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 PPP1CCP36873 323 aaKnown RBP16.99■□□□□ 0.31
CHD3-204ENST00000439235 CEACAM6P40199 344 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 GZMKP49863 264 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 LOXL3P58215 753 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 ARF6P62330 175 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 GNMTQ14749 295 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 METTL11BQ5VVY1 283 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 ZNF660Q6AZW8 331 aaPredicted RBP16.99■□□□□ 0.31
CHD3-204ENST00000439235 IDO2Q6ZQW0 420 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 C1orf122Q6ZSJ8 110 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 OR10V1Q8NGI7 309 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 FAM216AQ8WUB2 273 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 EDARADDQ8WWZ3 215 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 YPEL2Q96QA6 119 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 METTL8Q9H825 291 aaKnown RBP16.99■□□□□ 0.31
CHD3-204ENST00000439235 MMP26Q9NRE1 261 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 INSIG2Q9Y5U4 225 aa16.99■□□□□ 0.31
CHD3-204ENST00000439235 FAM240BA0A1B0GVZ2 78 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 FAM172BPA6NC97 362 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 TUSC2O75896 110 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 PPYP01298 95 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 AADACP22760 399 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 SLC6A1P30531 599 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 ECI1P42126 302 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 TMEM249Q2WGJ8 235 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 Q3ZCU0 254 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 LY6G6FQ5SQ64 297 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 LHFPL1Q86WI0 220 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 C11orf42Q8N5U0 333 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 TERB2Q8NHR7 220 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 COPZ2Q9P299 210 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 OR2W1Q9Y3N9 320 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 POLQO75417 2590 aa16.98■□□□□ 0.31
CHD3-204ENST00000439235 ITPR2Q14571 2701 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 GATA3P23771 443 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 CCR6P51684 374 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 RBMS2Q15434 407 aaKnown RBP16.97■□□□□ 0.31
CHD3-204ENST00000439235 MORN2Q502X0 79 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 GLCCI1Q86VQ1 547 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 MAPK1IP1LQ8NDC0 245 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 MOB3AQ96BX8 217 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 SLC25A21Q9BQT8 299 aaPredicted RBP16.97■□□□□ 0.31
CHD3-204ENST00000439235 SUCNR1Q9BXA5 334 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 TMPRSS13Q9BYE2 586 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 TMEM133Q9H2Q1 129 aa16.97■□□□□ 0.31
CHD3-204ENST00000439235 A0A087X0M5 115 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 A0A1B0GX30 115 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 ITGB1BP1O14713 200 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 IGHV4-31P0DP07 118 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 PRTN3P24158 256 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 LUMP51884 338 aaPredicted RBP16.96■□□□□ 0.31
CHD3-204ENST00000439235 FXYD4P59646 89 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 DCAF12L2Q5VW00 463 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 Q8N7P7 452 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 OR2AK2Q8NG84 335 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 TMEM186Q96B77 213 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 SCGB3A2Q96PL1 93 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 FXYD6Q9H0Q3 95 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 SIRPDQ9H106 197 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 RBM7Q9Y580 266 aaKnown RBP16.96■□□□□ 0.31
CHD3-204ENST00000439235 DSCAML1Q8TD84 2053 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 MALRD1Q5VYJ5 2156 aa16.96■□□□□ 0.31
CHD3-204ENST00000439235 TACC2O95359 2948 aa16.96■□□□□ 0.3
CHD3-204ENST00000439235 TOX4O94842 621 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 NDUFB6O95139 128 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 CD34P28906 385 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 RAB7AP51149 207 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 SURF2Q15527 256 aaPredicted RBP16.95■□□□□ 0.3
CHD3-204ENST00000439235 PLA1AQ53H76 456 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 AADACL3Q5VUY0 350 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 NRARPQ7Z6K4 114 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 OR13C8Q8NGS7 320 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 OR13D1Q8NGV5 346 aa16.95■□□□□ 0.3
CHD3-204ENST00000439235 TOMM40LQ969M1 308 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms